| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4777 |
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| Symbol | |
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| ID | 6119154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5765977 |
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| End bp | 5767200 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636358 |
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| Product | sodium/glutamate symporter |
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| Protein accession | YP_001763121 |
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| Protein GI | 170729095 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0786] Na+/glutamate symporter |
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| TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000131093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAGTACTG TTTATTCAAT TGGTGAACTT GAGTCGTTTT TAGTGGCGAT TTTGGTTCTG
TTTATCGGGC ATACGATTAA TCGTCACGTG CCGTTATTTA AAAAATATAA TATCCCAGAG
CCTATTGTCG GCGGTCTTAT CGTCGCCGCA GTGATCACTA TACTGCACTT CAATCAGATC
TCTATTCGCT TTACCCTCTC GATGCAGAAC ACCTTGATGT TGATGTTTTT CAGCACTGTG
GGTCTTGCTG CCAGCTATAA GTTGCTTCTC AAAGGCGGCA CTAAGGTGTT TATGTTTTTG
GGGGTCACCT CTCTGTTTAT TCTTGTTCAA AATGCCGTGG GGGTCAGCAT GGCAACGGCG
TTAGGTCTAG AGCCTTTTAT GGGGCTGATT GCCGGCTCCA TCACACTCTC CGGAGGTCAT
GGAACAGGGG CGGCTTGGGC GCAAACCTTC TATGAAGACT ATGGCGTCAA TACGCTTGAG
TTTGCCATGG CCGCTGCAAC ATTTGGTTTG GTTATGGGGG GAATCATCGG TGGGCCAGTA
GCCCAGAGGT TAATCAATAA GAATAACTTA GTCTCCTCAT ATGGGGTGGG GGGCAACCAC
CATAAAGATC ATCCTGAATT GGTAACCTAT GATCAACTGG AGGAGGATAG GGTTACGGCT
AAGAGTATTC TTGAGGTGCT GTTTATTCTT CTGTTATGTG TCGCAGGAGC CAAATGGATA
GGAACGCTTA TCTCCTATCT GGATATCAGT TGGCTGAAGA TGCCTGAATT TGTCTATGCA
CTTTTTCTCG GTGTGGTGAT TGCGAATATT ACAGAGCTTT CCCATGGCTA TAAGATCAAG
AGTGAGAGTG TTGATGTATT GGGTACAGTC TCTTTGTCAC TGTTTTTGTC CATGGCCTTG
ATGAATCTTA AGCTGTGGGA GATATTCGAT CTTGCCCTGC CTCTGCTCGC TATCTTGTTG
GTGCAAACAC TGACGCTAGC GCTGTTTGCT TACTTCATTA CCTTTAGATT TATGGGAAGT
AACTATGATG CTGCTGTGAT GGTCGGAGGC CACTGTGGCT TCGGTATGGG AGCAACGCCT
ACAGCGGTGA TGAACATGGG CGCGCTCGTC TCCAGAACTG GCCCTTCGCC TCAAGCCTTT
ATGGTGGTGC CTATTGTGGG GGCTTTCTTT ATCGATATCG TCAATGCCAT TATTTTGAAA
GGCTACCTCA GCTTTATCGG CTAA
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| Protein sequence | MSTVYSIGEL ESFLVAILVL FIGHTINRHV PLFKKYNIPE PIVGGLIVAA VITILHFNQI
SIRFTLSMQN TLMLMFFSTV GLAASYKLLL KGGTKVFMFL GVTSLFILVQ NAVGVSMATA
LGLEPFMGLI AGSITLSGGH GTGAAWAQTF YEDYGVNTLE FAMAAATFGL VMGGIIGGPV
AQRLINKNNL VSSYGVGGNH HKDHPELVTY DQLEEDRVTA KSILEVLFIL LLCVAGAKWI
GTLISYLDIS WLKMPEFVYA LFLGVVIANI TELSHGYKIK SESVDVLGTV SLSLFLSMAL
MNLKLWEIFD LALPLLAILL VQTLTLALFA YFITFRFMGS NYDAAVMVGG HCGFGMGATP
TAVMNMGALV SRTGPSPQAF MVVPIVGAFF IDIVNAIILK GYLSFIG
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