Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4726 |
Symbol | |
ID | 6119103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5704503 |
End bp | 5705702 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641636308 |
Product | general secretion pathway protein L |
Protein accession | YP_001763071 |
Protein GI | 170729045 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3297] Type II secretory pathway, component PulL |
TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTGA GTGAAAGATT ATTTATTCGC TTAGGAACAA GTTCAGATCA AGCATGCTCT TGGTTGGTTT GGTCCGAGCA GGAGCAGGAG ATCATCGCTT CAGGTGAGCT AAAAGATGCC AGTGCATTAA GTAGCTTAAC TGAGCGTGCC GGTAACCGTC CTGTGGATGT GTTGGTGCCA TCATCTGCGA TCACATTGAC CTCTGTGGAG TTGCCAGAAA AAGGGCAACG CCAAGCCATT CAAGCGCTTC CTTTTATGTT AGAGGAGTCG CTAGCTGAAA ACGTCGATGA GCTTCATTTT GTCCCCGGTC CACGTACCGA TGGCGAGCTG AGTGTTGCCG TTGTTGCACA TCAGCAGATG CAGGATTGGT TAAGCTGGTT ACATGAGGCT GGGCTTAAAG TTAAGAATGT TGTGCCTGAC TGCTTAGCTC TTCCTCTTGA TGAGTGCCAG TGGGCAGCGA TTAAGTTTAA CCAAGAGTAT CTGGTTAGAA CCGGTGAAGG TTCTGGTGTG AGTTTGACTC AAGACTGGTT AGATACGCTA CTGCCTAGAT TGTTACCAGA AGGGCAAGAG ACACCTGTGA CCGTTGCCGG ACACAGTGAA CTGGCCTTTG CTGGTGCAGA TATCAAGCCT CAAGCCCTTG AGCTGCCTAT GTTAGTACTG GCTAAAGGGA TACTTTCAGC TCCCCTGAAT CTGTTATCTG GTGTTTATAC CCCTAAGCGT GAATACGGTA AAAATTTACT GCTTTGGCGT AATGTCGCCA TTGTGATTGG TGTTGCCTTA GTACTTGGTT TAGTTAATAA AGGGCTCAAT ATTCATCAGA TGAATACAGA GCAGGCGAGA CTGAAAGCGG AAAGTGAAGC TATCTACAAG CGAGCGGTGC CCGGCAGTTC GAGAATTGTA AACCTGAGAT CTCAGATGGA GAAACAGCTG CGAAGCATGC AGGGAGGCAG TGGTGGCAGT GAGTTTTTCA CTATGCTTCA AGGCTTAGAA CCCGCCTTTA CTCAAGTGCC AGAGCTAAAG CCTACGACCT TGCGTTTTGA CAGCGTCCGC AATGAACTGA GAATGCAGGT CATCGCTAAG AGTTATGCCC AGGTTGAGCA GTTTAAGACG ATAGTGTCAG CCTCCTATCA GCTTGATTCA GGAGCGATGA ACAGTGGTGA AGACTCAGTG ACCAGCACCT TAACGCTGAG GAGCAAATAA
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Protein sequence | MNVSERLFIR LGTSSDQACS WLVWSEQEQE IIASGELKDA SALSSLTERA GNRPVDVLVP SSAITLTSVE LPEKGQRQAI QALPFMLEES LAENVDELHF VPGPRTDGEL SVAVVAHQQM QDWLSWLHEA GLKVKNVVPD CLALPLDECQ WAAIKFNQEY LVRTGEGSGV SLTQDWLDTL LPRLLPEGQE TPVTVAGHSE LAFAGADIKP QALELPMLVL AKGILSAPLN LLSGVYTPKR EYGKNLLLWR NVAIVIGVAL VLGLVNKGLN IHQMNTEQAR LKAESEAIYK RAVPGSSRIV NLRSQMEKQL RSMQGGSGGS EFFTMLQGLE PAFTQVPELK PTTLRFDSVR NELRMQVIAK SYAQVEQFKT IVSASYQLDS GAMNSGEDSV TSTLTLRSK
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