| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4710 |
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| Symbol | |
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| ID | 6119087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5687538 |
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| End bp | 5688635 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641636292 |
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| Product | tRNA (uracil-5-)-methyltransferase |
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| Protein accession | YP_001763055 |
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| Protein GI | 170729029 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00221192 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.103936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATTTAG CAGCAATGGA TCCTAATACC TATGATGCGC AACTCGAAGA AAAACGTATC
AAGCTGGAAA ACATATTCAC TGACTTTGAT ACACCGAATT TAGAAGTATT TAGCTCTGAG
CAAGCCCATT ATCGTATGCG TGCAGAGTTC CGTATCTGGC ATGATGGCGA AGATATGTAC
TACTACATGT TTGATAAAGC ACTTAATAGT AAGGTTCGCT GTGATCAATT TTTGCCTGCC
AGCAAATTGA TCAATGAGAT GATGCCTGCG CTTATCGCTG AATTAAAGCC AAACCCTTTA
CTTAGACACA GACTGTTCCA GATTGATTTC CTCTCAACCT TAAGTGGTGA GATTCTAGTT
TCTCTGCTTT ACCATAAGCA ACTCGATGAA CAGTGGGAAA CAGAAGCAAA ATCTCTGAAA
GAGAGATTAG CCAGCAAATT TAACGTAAAT ATTATTGGCC GCGCACGTAA ACAAAAGCTG
ATCTTCGATA AGGACTTTGT GGTTGAGTCA CTACAGGTGA ATGGTGAACA GTTACAGTAT
CATCAGATAG AGAACAGCTT CACTCAGCCT AACGGCAAAG TATCGGTTAA GATGCTCGAA
TGGGCCATTG ATGTCACCAA GAACAGTTCA GGTGATCTAT TGGAGCTCTA TTGTGGTAAC
GGTAACTTCT CTATCGCGCT GGCACAAAAC TTCGATCGTG TGCTGGCCAC TGAGCTTGCT
AAACCTTCTG TTGAATCTGC ACAGTACAAT ATCAAGATAA ACAAGATTGA TAACCTTCAA
ATTATCCGTA TGTCAGCAGA GGACTTTACC GATGCAATGG CGAAAAAGCG CAGCTTTAGG
CGGTTAGAGG GGATCGATTT AGATAGCTAT AACTGCAACA CCATCTTTGT TGACCCGCCA
CGTGCAGGTA TGGACCCAGA TACAGTAAAA CTCGTACAAG GTTATGAGCG TATTGTTTAC
ATCTCATGTA ACCCTAATAC ACTTATCGAC AATTTGGTTG AGTTAAGCAA AACCCATAAG
ATCACCCGCT TTGCGCTATT CGATCAGTTC CCATATACAG ATCATATGGA GTCAGGGGTT
TTCTTAGAGA GAAAATAG
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| Protein sequence | MNLAAMDPNT YDAQLEEKRI KLENIFTDFD TPNLEVFSSE QAHYRMRAEF RIWHDGEDMY
YYMFDKALNS KVRCDQFLPA SKLINEMMPA LIAELKPNPL LRHRLFQIDF LSTLSGEILV
SLLYHKQLDE QWETEAKSLK ERLASKFNVN IIGRARKQKL IFDKDFVVES LQVNGEQLQY
HQIENSFTQP NGKVSVKMLE WAIDVTKNSS GDLLELYCGN GNFSIALAQN FDRVLATELA
KPSVESAQYN IKINKIDNLQ IIRMSAEDFT DAMAKKRSFR RLEGIDLDSY NCNTIFVDPP
RAGMDPDTVK LVQGYERIVY ISCNPNTLID NLVELSKTHK ITRFALFDQF PYTDHMESGV
FLERK
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