| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4699 |
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| Symbol | rplJ |
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| ID | 6119068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5670442 |
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| End bp | 5670942 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641636273 |
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| Product | 50S ribosomal protein L10 |
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| Protein accession | YP_001763044 |
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| Protein GI | 170729018 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0244] Ribosomal protein L10 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000246782 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000548606 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCATTAG GACTCGAAGA CAAAAAAGCG ATTGTTGCTG AAGTCAACGA AGCTGCCAAA
GGTGCTTTAT CTGCAGTTGT AGCCGATTCA CGCGGTGTAA CTGTAGGTGA AATGACCGGA
CTGCGTAGAG CAGCTCGTGA AGCCGGAGTT TACGTTAAAG TTGTTCGTAA CACTCTAGTT
AAACGCGCTG TAGCTGGTAC TGATTTTGAG TGCTTAAGCG ATACGTTTAC TGGTCCTACT
TTAATTGCAT TCTCTAATGA GCACCCAGGT GCTGCAGCGC GTCTTCTTAA AGATTTCGCA
ACTGCACAAG AGAAGTTTGA AATTAAAGCA GCAGCCTTTG AAGGGGAAGT AATCCCTGCA
GCCGATATTG ATCGTTTAGC GAAATTGCCA ACGTACGACG AAGCATTAGC TCAGTTGATG
ATGACTATGA AAGAAGCATC TGCTGGCAAA TTTGTACGTC TACTGGCCGC ACTTCGCGAT
CAAAAAGAAG AAGCAGCTTA A
|
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| Protein sequence | MALGLEDKKA IVAEVNEAAK GALSAVVADS RGVTVGEMTG LRRAAREAGV YVKVVRNTLV
KRAVAGTDFE CLSDTFTGPT LIAFSNEHPG AAARLLKDFA TAQEKFEIKA AAFEGEVIPA
ADIDRLAKLP TYDEALAQLM MTMKEASAGK FVRLLAALRD QKEEAA
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