| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4690 |
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| Symbol | rplC |
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| ID | 6119059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5655520 |
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| End bp | 5656158 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636264 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001763035 |
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| Protein GI | 170729009 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000266431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000247869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGCTATCG GTCTTATCGG TCGTAAAGTG GGTATGACAC GCATCTTCAC TGAAGATGGT
GCTTCTATCC CAGTAACAGT AATTGAAATC GCAGCTAACC GCGTAACTCA GGTGAGAACC
TTAGAGACTG ACGGTTACCG TGCACTTCAA GTGACTACTG GTACTAAAAA AGCTAATCGC
ATCACTAAGC CAGAAGCTGG TCACTTTGCT AAGGCGGGCG TTGAAGCCGG TCGTGGTTTG
TGGGAAGTTC GTTTGGCAGA TGATGAAGGC GAAGGCATTG AAGTTGGTGC TGAGCTAAAT
GTTGATATCT TCGCTGACGT AGCGAAAGTT GATGTTACAG GTCAATCTAA AGGTAAAGGT
TTCCAAGGCG GTATTAAGCG TTGGAACTTC CATGCACAAG ATATGACACA CGGTAACTCA
CTGGCACATA GATCCAACGG TTCTATCGGT CAAAACCAAA CACCTGGTCG CGTTTTCAAA
GGTAAGAAAA TGTCAGGCCA CATGGGTGCA GAGCGTGTTA CCACTCAGAA TCTAGACGTT
GTACGTGTAG ATGCAGAGCG TAACTTGCTA TTGGTTAAGG GTGCTGTTCC GGGAGCCACA
AATGGCAACC TGATCATCAA GCCTGCCGTT AAAGCTTAG
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| Protein sequence | MAIGLIGRKV GMTRIFTEDG ASIPVTVIEI AANRVTQVRT LETDGYRALQ VTTGTKKANR
ITKPEAGHFA KAGVEAGRGL WEVRLADDEG EGIEVGAELN VDIFADVAKV DVTGQSKGKG
FQGGIKRWNF HAQDMTHGNS LAHRSNGSIG QNQTPGRVFK GKKMSGHMGA ERVTTQNLDV
VRVDAERNLL LVKGAVPGAT NGNLIIKPAV KA
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