| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4683 |
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| Symbol | rplP |
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| ID | 6119052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5651999 |
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| End bp | 5652409 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636257 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_001763028 |
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| Protein GI | 170729002 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000184582 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000132516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGCTGCAAC CAAAACGAAT GAAGTTTCGT AAAATGTTCA AAGGCCGCAA CCGTGGTCTT
GCGAACGGCA CTGAAGTTAG CTTCGGTGAT TTCGGTCTGA AGGCTGTTGG TCGTGGTCGT
TTGACTGCGC GTCAGATCGA AGCTGCACGT CGTGCGATGA CACGTCACAT TAAACGTCAA
GGTCAAATCT GGATCCGCGT TTTCCCTGAC AAGCCAATTA CCTCTAAGCC TCTTGAAGTG
CGTATGGGTA AAGGTAAGGG TAACGTTGAA TACTGGGTTT GCCAGATTCA ACCAGGTAAG
GTTCTTTATG AGATGGATGG TGTATCAGAG GAGTTAGCTC GTGAAGCTTT CGCTCTTGCT
GCTGCCAAAC TACCTCTTAA GACTACCTTT GTAACTAAGA CGGTGATGTA A
|
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| Protein sequence | MLQPKRMKFR KMFKGRNRGL ANGTEVSFGD FGLKAVGRGR LTARQIEAAR RAMTRHIKRQ
GQIWIRVFPD KPITSKPLEV RMGKGKGNVE YWVCQIQPGK VLYEMDGVSE ELAREAFALA
AAKLPLKTTF VTKTVM
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