Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4657 |
Symbol | |
ID | 6119026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5637074 |
End bp | 5638324 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641636231 |
Product | cytochrome c-type biogenesis protein CcmI |
Protein accession | YP_001763002 |
Protein GI | 170728976 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4235] Cytochrome c biogenesis factor |
TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000855985 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCACTC TTTGGATTTT TATTGCGCTT TTCTTATTAG TCAGCCTAGT GCTGATTTGG TTTCCTCACT TTCGACAGCA AAAGATGCTG CAGACGGAAG AAGCTGGGGT ACGTAAACAA ACAAACCTCG AACTATTTAA CAATCGTCTT GCAACATTAG AGAAAGAACT TGAAGATGAA CAGCTAGATC AAGTTGAGTT CGACGCCCTC AAAAAAGAGC TTGAGATAAG CTTACTCCAA GATATGAAGC AAGGTAGTAG TGATGAGTCT CTTGTCACTA AGATGAAACC AAAAGGCTTA CTATGGCCTG TGGTTATGTC TGTTGCCGTA TTAGGTATCT CTGGATACTT TTATACCAGC TTAGGCGCCT ACGCTAACTT AGACAAAACA GAGCAAGCTA GCCCACATGC TGGCATGACT GCAGATCAAG TTATGCAACA ACGTCTACAG ATGATGGAAG CGCAAGCTAA AGCTGAGCCT GAGAACAGCC AGTTACTCTT TAGCCTTGGC CATAGTTACA TATCTGCCAA CCGTTATGAT GACGCGATAA AGACTTTCGA TAAAGCAATG GTATTAGTAG GCACACACGC TGAGCTACTC GGACCAAAAG CGACAGCCAT GTACTACAAG GCAAACCAGC AGATGACACC TGCGGTACAA GCTATTGTTG ATCAAGCTCT GTCTCTGGAT CCTGAAGACC CATCAACACT TCTGTTAGTA GGTATGGATT CATTCTTTAC TGCTAATTAT CAGAAAGCGA TAGATTCATG GCAGATCATT CTCGATAGCG ACCGTAAAGA TGTCGATCGT AGTGCCATCA TTAATGCTAT CGATAGCGCT AAGATGAGAA TGCAGGCAGA TACCGGCGAA ATGCCAAATG ACGCAGCCCA TGCCAATGTT CAAAACACGG CTAAGACTGT TAATGTCGAA GTTTCAGTAT CAGATGAACT AGCTCAGCAG GTTGGCAGTT CAGACATGCT ATTCATCTTC GCTCGCAACA CTGAAGGCCC TAAGGTGCCA TTAGCTGCAG TTAAAGTCTC CGCAAAATCG CTACCAACAA CAATCACATT GGATGACACG ACCTCTATGG GCGGCGATGT GAAGTTAAGT GGAGCTAAGC AAGTTGAGAT TATTGCGGTT CTGTCTAAAC ATGGAACGGT TAAACCACAA TCAGGCGATC TTAAAGGTCA CCTTGCAATG GTTAATGTCG GTGATACCGC TCAGCTAATT ATCGACACTC AAGTCAAATA A
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Protein sequence | MTTLWIFIAL FLLVSLVLIW FPHFRQQKML QTEEAGVRKQ TNLELFNNRL ATLEKELEDE QLDQVEFDAL KKELEISLLQ DMKQGSSDES LVTKMKPKGL LWPVVMSVAV LGISGYFYTS LGAYANLDKT EQASPHAGMT ADQVMQQRLQ MMEAQAKAEP ENSQLLFSLG HSYISANRYD DAIKTFDKAM VLVGTHAELL GPKATAMYYK ANQQMTPAVQ AIVDQALSLD PEDPSTLLLV GMDSFFTANY QKAIDSWQII LDSDRKDVDR SAIINAIDSA KMRMQADTGE MPNDAAHANV QNTAKTVNVE VSVSDELAQQ VGSSDMLFIF ARNTEGPKVP LAAVKVSAKS LPTTITLDDT TSMGGDVKLS GAKQVEIIAV LSKHGTVKPQ SGDLKGHLAM VNVGDTAQLI IDTQVK
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