| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4655 |
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| Symbol | |
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| ID | 6119024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5634112 |
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| End bp | 5634669 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641636229 |
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| Product | periplasmic protein thiol--disulphide oxidoreductase DsbE |
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| Protein accession | YP_001763000 |
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| Protein GI | 170728974 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.115557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0112041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAGA GGCTAGTACT ATTTATTCCT TTGGTACTAT TTTTGGTGAT GGGGGTGTTC
CTTTATAAGG GACTCTTCCT TAATCCTCAA AAGCTAGACT CTGCACTTGA GGGAAAGCCA
GTTCCGGCTT TCCAACTTGA GCGTCTAGAG GACCGAAATG AGATAATCAC TAACGAAAGC
TTAAAGGGTG AGGTTGCTCT ATTGAATGTG TGGGCAACTT GGTGTCCATC ATGTAAATAT
GAACACCCCT ATTTAATGCG CTTTGCACGT CAAGGTATTC TGCCTATCTA TGGTATTAAC
TACCGTGATG AGCGTCCACT GGCGATTCGC GAATTAAATC GTGAAGGTGA CCCTTATACT
AAGAATATCT TTGATCATGA TGGTCGCTTA GGTTTGGATC TTGGTGTGTA TGGTGCACCA
GAAAGTTACT TAATCGATCA TAATGGCATT ATTCGTTACC GTTATGCGGG GCCGATCGAT
CAAAGGATAT GGAGTGAAAC CTTACTTCCT ATGATTAAAG AACTTCAGGC TGCAGCTAAA
TTGGATGGTG CTTCATGA
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| Protein sequence | MKKRLVLFIP LVLFLVMGVF LYKGLFLNPQ KLDSALEGKP VPAFQLERLE DRNEIITNES
LKGEVALLNV WATWCPSCKY EHPYLMRFAR QGILPIYGIN YRDERPLAIR ELNREGDPYT
KNIFDHDGRL GLDLGVYGAP ESYLIDHNGI IRYRYAGPID QRIWSETLLP MIKELQAAAK
LDGAS
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