Gene Swoo_4644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4644 
Symbol 
ID6119010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5615195 
End bp5616151 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content41% 
IMG OID641636215 
ProductNMT1/THI5-like domain-containing protein 
Protein accessionYP_001762989 
Protein GI170728963 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAGAT TCACAGTCAG TCTGTTCATC TCTCTTCTAC TTGTTGCTTG CAGTCCCAAA 
CCAGTAACAA AAACAATCAC CATCGCCATC AATCCTTGGC CAGGATACGA ATTACTGTAC
CTCGCCGAAA GTAAAGGTTT TTTCAAACAA GTAGGGCTAG ATATTAAGCT CTCTCAGACA
GCCACACTCT CCGATGCTCA GCGAGCTTAC ATAAGTGGCC GAGTTGATGG TTTTGCTAGC
ACCATAGTCG AAGCAGTTCA GGCACAAGAG TTTGGTGGAG ACCCCTTAAA TATAGTTTTG
CTAGCAGACT ACTCCAATGG TGGCGATCTC ATTGTAAGCC ATGAAGACTT TAAAACATTG
AACCAACTCA AAGGACAAAA AGTGGGTTGT GAGGTGAGCT CTCTGGGGAT CTATATCTTA
GCTAGAGCGC TTGCGGTATA CGATATGTCC CTAGACGATG TGGAGATCGT TAATATGGAA
CAGGGCAATG CTCTCCAAGC GTTAAATAGT GGCCACATTG ATGCCATGGT CACCTATCCC
CCCTATTCAT TTGAAATTTT AAACAGCACC AGCCAAAAGA GTCACAAAGT TTTTACCACA
GCAGAGATCC CAAATGAGAT ATTAGATACC GTTTCCTTTT CACAAAATGT GATAAAAGCC
AACCCAGATT TAGTGCCTAA GCTACAACAA GCTTGGCAGC TAGCTTATGA CTATCTTGAA
CAACACCCAG ATGAAGCCAT TCAGTTGATG GCTGAACGAG AACTTATATC AGTTGATGAG
TTTAGTCAGT CACTTGCTGA CATCTATTTA TTAAGTAATC CAGAGCAAAA TAAATTATTA
AAAGAGAATA AGAAGCTAAC AAACCTTGCT CAATCAGTTT GTGACACTCT CAATAAAGTC
GGTGCATTTG ACAGTTCATG TGAGCATATA GAAACGCTTT TCTATACTGG GATTTAA
 
Protein sequence
MLRFTVSLFI SLLLVACSPK PVTKTITIAI NPWPGYELLY LAESKGFFKQ VGLDIKLSQT 
ATLSDAQRAY ISGRVDGFAS TIVEAVQAQE FGGDPLNIVL LADYSNGGDL IVSHEDFKTL
NQLKGQKVGC EVSSLGIYIL ARALAVYDMS LDDVEIVNME QGNALQALNS GHIDAMVTYP
PYSFEILNST SQKSHKVFTT AEIPNEILDT VSFSQNVIKA NPDLVPKLQQ AWQLAYDYLE
QHPDEAIQLM AERELISVDE FSQSLADIYL LSNPEQNKLL KENKKLTNLA QSVCDTLNKV
GAFDSSCEHI ETLFYTGI