| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4643 |
|---|
| Symbol | glnA |
|---|
| ID | 6119009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 5613619 |
|---|
| End bp | 5615028 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641636214 |
|---|
| Product | glutamine synthetase |
|---|
| Protein accession | YP_001762988 |
|---|
| Protein GI | 170728962 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | [TIGR00653] glutamine synthetase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCTG AATTAGTTTT ACAACAAATA GAAGAACTGG AAGTTAAGTT TGTTGATTTG
CGTTTTACCG ATACGATAGG TAAAGAGCAA CACGTTTCAA TCCCTAGCCA CCAAGTGGAC
GCTGATTTTT TTGAAGACGG TAAGATGTTC GATGGCTCTT CAATCTCAGG TTGGAAAGGC
ATCAACGAAT CAGACATGGT GTTAATGCCA GATCCTGAAA GCTTTGTACT CGATCCTTTC
ACTGCAGAGA CAACAGCTAA TATCCGTTGT GACATCCTTA ACCCAGGCAC AATGACAGGT
TACAACCGTG ACCCTCGCTC AATTGCTAAG AAAGCTGAAG ATTACTTACG CTCAACAGGT
ATTGCTGACA CAGTATTAAT TGGTCCTGAG CCAGAGTTTT TCCTATTTGA TGATGTGAAG
TTCAGCTCAG ATATGTCTGG TTGCTTCTAC AAGGTTGATG CTGAAGAAGC AGCATGGAAC
TCAGGCACTA GCTACGAAGA TGGTAACAAG GGTCACCGTC CTGGTGTTAA AGGCGGTTAC
TTCCCAGTTG CTCCTGTTGA CTCTTCACAA GATATCCGTA GTGCAATGTG TCTTGTACTT
GAAGAGATGG GCCAAGTGGT TGAAGCACAT CACCATGAAG TGGCAACAGC TGGTCAAAAC
GAGATCGCAA CTCGCTTTAA CACACTAACA CTTAAGGCCG ATGAAGTTCA GGTACTTAAG
TATGTTATCC ATAATGTTGC TCACGCTTAC AACAAGACAG CGACATTTAT GCCTAAGCCA
ATCGTTGGTG ACAACGGTAG TGGTATGCAC GTTCACCAAT CTCTAGCAAA AGATGGCGTT
AACATCTTTG CCGGTGACAA GTATGGCGGA TTGAGCGAAA CAGCACTTTT CTACATTGGT
GGTATTATCA AGCATGCTCG TGCTATCAAC GCATTCGCTA ACCCATCAAC GAACTCTTAC
AAGCGTCTTA TCCCGCACTT TGAAGCACCA GTAATGCTTG CATATTCTGC AGCTAACCGC
AGTGCTTCTA TCCGTATCCC AGTGGTACCA AGTGCTAAGG CTCGTCGTAT CGAACTTCGT
TTCGGTGACC CAATGGCTAA CCCATACCTC GCCTTCTCAG CAATGTTGAT GGCAGGCCTT
GACGGTATCC AGAACAAGAT CCACCCTGGT GAAGCGATGG ATAAAGATCT GTATGACCTA
CCAGCTGAAG AAGCTGCTGA GATCCCAACC GTTGCAACGT CGCTTGAAAA TGCACTTGAG
TGTCTAGATG CTGATCGTGA GTTCCTAACA CGCGGTGATG TGTTCAGTAA TGACTTTATC
GATTCATATA TCGCACTTAA GTCTGCTGAT GTTGAGCGTA TCAACCAAAC AACTCACCCT
GTTGAGTTCG AGCTTTACTA CAGCTTATAA
|
|---|
| Protein sequence | MSAELVLQQI EELEVKFVDL RFTDTIGKEQ HVSIPSHQVD ADFFEDGKMF DGSSISGWKG
INESDMVLMP DPESFVLDPF TAETTANIRC DILNPGTMTG YNRDPRSIAK KAEDYLRSTG
IADTVLIGPE PEFFLFDDVK FSSDMSGCFY KVDAEEAAWN SGTSYEDGNK GHRPGVKGGY
FPVAPVDSSQ DIRSAMCLVL EEMGQVVEAH HHEVATAGQN EIATRFNTLT LKADEVQVLK
YVIHNVAHAY NKTATFMPKP IVGDNGSGMH VHQSLAKDGV NIFAGDKYGG LSETALFYIG
GIIKHARAIN AFANPSTNSY KRLIPHFEAP VMLAYSAANR SASIRIPVVP SAKARRIELR
FGDPMANPYL AFSAMLMAGL DGIQNKIHPG EAMDKDLYDL PAEEAAEIPT VATSLENALE
CLDADREFLT RGDVFSNDFI DSYIALKSAD VERINQTTHP VEFELYYSL
|
|---|
| |