| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4601 |
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| Symbol | |
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| ID | 6118967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5572475 |
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| End bp | 5574178 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636172 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001762946 |
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| Protein GI | 170728920 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG4261] Predicted acyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00228674 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCACTGG CCTTAGTTAT TCCCAACTAT AACCACAGAG TCGCGATTGA GCAGACCCTT
CAGGCACTCG CTCATCTCAA TCTCCCCTGC TACTTAGTTA ATGATGGTAG CGACGATAAA
ACCTGCCATC TCCTGCTTGA GCTTGATGCC AAATACCCTT GGGTGACCTT AATTCACCAC
CCTTTTAACC GAGGTAAAGG AGCTGCGGTC ACAACGGGAC TAAGAGCGGC GTATCAAGAT
GGTTTTACTC ATGCCCTGCA AGTCGATGCC GACGGTCAGC ACAATTTAGA TGATATTCCA
GCCATGATAA CTAAGTCTGA GCTACATCCT CAGGCCTTGA TCTCTGGATT GCCGCAATAT
GATGAATCAG TCCCTAAAGG TCGCTACTAC GCTCGCTACC TCACCCATTT TTGGGTCTGG
GTTGAAACCT TAAGTTTCGA TATTCAAGAT TCTATGTGTG GCTTTCGCGT CTATCCTCTG
GCGGCTACCG AGCACCTATT TCTAACCGAG TCCCTAGGTG AGCGCATGGA TTTCGATATC
GAAATCTTAG TTCGTTTACA TTGGCAAGGG GTTGAAGTAC TCCACCTACC AACTCAGGTT
ATCTACCCAG AAGATGGTGT TAGCCACTTC CAAGGGCTGT GGGACAATAT TCGCATATCT
AGCATGCACA CTCGCCTAGT GTTTGGCATG TTAAGGCGCT TGCCCCAGAG AGTATTTAAA
CAGAAAGATA ATCAACACTG GTCAAGGATC AGTGAACGCG GCAGTTATTG GGGGATCAAA
CTACTTGCTG CCAGCTATAA GCTAGGCGGT CATTGGCTTT GCCGCGCTAT CATGTACCCA
GTGATCTTCT ACTTCTTCCT GACAGGTCGT CATGCCCGTG AAGCATCACA AACATTTCTT
AAGCAGGTAA AGGCATTCGA TCCAGAGCAC CCTCAACTCC AAGAGGAGGT AAGCTGGCGT
CACAGTCTTA AACATTTTAT CACCTTTGGT AATGCCGCAC TGGATAGAAT TGATGCCTGG
TGCGATCGCA TCCAGCTTAG CCAGATAGAG TTTCCCAACA GAGAGCTATT AGCAGAGCAA
CTCGAAGCGG GACAAGGTGC CGTGTTACTG GTTTCTCATT TAGGCAACCT TGAACTGTGT
CGCGCCATCT GTATTAATCA GAAGCAAGTT AAAGTGAATG TGATGGTTAT GACTCAAAAT
GCGGAAAACT TTAATCGCGT TTTGAAGCAG TTAAACCCAG ATAGTTCACT CAATCTGATC
CAAGTGACTG AACTTGGACC AACAACCTCC ATGCTATTGC AGCAGAAGGT GGAACAGGGT
GAACTCGTTG TCATTGCCGG AGACAGAACC TCGACCAACA CTCAGGGTCG TGTCGTTTAC
TCCCCCTTTA TGGGCAAAGA AGCGCCCTTC CCTCAAGGCC CCTTTATTCT TGCAGGTTTA
TTAGATTGCC CGGTTTATTT GATGTTCTGT CTAAGAGAGC AAGGGGTTTA TCATGTCCAT
CTGGAAGCAT TTTCAAACAC ATTAAAAGGG CCAAGAAAAG GCCGTATGCA AAGGCTCGAA
GAAGCCGTCC ATCACTACAG CGCACGACTC GAATATTATG CACGGCGAGA GCCACTGCAA
TGGTTTAATT TTTTTGATTT TTGGCATAAG GATTCAGAGA TCCAGCGGAC CAAACATCAG
GGTGAAGATA GGACTGGTAA ATAG
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| Protein sequence | MSLALVIPNY NHRVAIEQTL QALAHLNLPC YLVNDGSDDK TCHLLLELDA KYPWVTLIHH
PFNRGKGAAV TTGLRAAYQD GFTHALQVDA DGQHNLDDIP AMITKSELHP QALISGLPQY
DESVPKGRYY ARYLTHFWVW VETLSFDIQD SMCGFRVYPL AATEHLFLTE SLGERMDFDI
EILVRLHWQG VEVLHLPTQV IYPEDGVSHF QGLWDNIRIS SMHTRLVFGM LRRLPQRVFK
QKDNQHWSRI SERGSYWGIK LLAASYKLGG HWLCRAIMYP VIFYFFLTGR HAREASQTFL
KQVKAFDPEH PQLQEEVSWR HSLKHFITFG NAALDRIDAW CDRIQLSQIE FPNRELLAEQ
LEAGQGAVLL VSHLGNLELC RAICINQKQV KVNVMVMTQN AENFNRVLKQ LNPDSSLNLI
QVTELGPTTS MLLQQKVEQG ELVVIAGDRT STNTQGRVVY SPFMGKEAPF PQGPFILAGL
LDCPVYLMFC LREQGVYHVH LEAFSNTLKG PRKGRMQRLE EAVHHYSARL EYYARREPLQ
WFNFFDFWHK DSEIQRTKHQ GEDRTGK
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