| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4562 |
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| Symbol | |
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| ID | 6118928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5531639 |
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| End bp | 5532865 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641636133 |
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| Product | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase |
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| Protein accession | YP_001762907 |
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| Protein GI | 170728881 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
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| TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000446325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000437199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAACCAGA GTCAGAATAA AAGTCAGGTA ACCAAAAATG TCTTGCTCGC CATTGGAGGC
GGAATTGCAG CCTACAAGTC AGCCGATCTT ATACGCCGCT TAAAAGAGCG CGGGTTTGAT
GTGCGGGTTG TCATGAGTCA AAGTGCAAAA GAGTTTATCA CCCCCCTGAC TTTGCAGGCC
TTATCAGGGT ACCCTGTCGC TTCAGATCTA CTGGATCCTG CTGCAGAGGC TGCCATGGGT
CATATTGAGC TGGCTCGGTG GGCCGATCTG GTTGTTGTGG CCCCTGCGAC TGCTAATCTA
ATCGCACGTA TCAATGCAGG TATGGCCGAT GAACTTATCA CCACAACCTG TTTAGCTACA
GAGGCTCCTG TGGTTATCTG CCCAGCCATG AATCAGCAGA TGTACCGCAA TCAAGCAACC
CAAGATAATC TAGCAAACTT AACCAAACGT GGTTTAACGA TCTGGGGACC AGCATCAGGT
AGCCAAGCGT GCGGTGAAGT AGGCCCAGGT CGTATGCAAG AGCCTCTGGA AATAGCCCTG
CAAGTAGAAC AATTTTTTGC ACCTAAATTA CTTCAGGGAA AATCTATTCT ACTCACCGCA
GGACCAACTC GAGAAGCGAT AGATCCTGTT CGCTACATCT CAAACCACAG CTCAGGAAAG
ATGGGCTTTG CAATTGCCGC TGCCGCAGCT GCTATGGGCG CCGATGTCAT CTTAGTCGCA
GGCCCTGTGC ACTTACCAAC ACCCTCAGGT GTTAAGCGTA TCGATGTGGA ATCGACTCAA
GATATGCTCA GCGCCGTTAT GCAGCATGTT GATACTCATG ATATTTTTAT CGGCTGCGCT
GCTGTTGCCG ATTATCGCAT CGACCAGGTA GCCGAAGATA AAATAAAAAA ATCAGCACAG
GATATGCAAC TTGCACTCGT TAGAAATCCT GATATCTTAG CCACGGTTGC CAGCCACAAA
CCGCGTCCCT TTACGGTCGG CTTTGCCGCC GAGACTAAAG ACGTCGAGCA TTACGCCAAA
GATAAACTTA TCAGGAAAAA GCTCGACATG ATTGCGGCAA ATGACGTGTC TAACCCAGCT
CAAGGGTTTA ACACAGAGCA GAACGCACTT AAGGTCATCT GGGCCAACGG ACAGCAAGAC
CTGCCAACCA CTGATAAGCA GATATTAGCA GGTCAACTAC TCACATTAAT TGCGGATCAA
CTAGCCCTTT TAAAAGACGA CAAGTAA
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| Protein sequence | MNQSQNKSQV TKNVLLAIGG GIAAYKSADL IRRLKERGFD VRVVMSQSAK EFITPLTLQA
LSGYPVASDL LDPAAEAAMG HIELARWADL VVVAPATANL IARINAGMAD ELITTTCLAT
EAPVVICPAM NQQMYRNQAT QDNLANLTKR GLTIWGPASG SQACGEVGPG RMQEPLEIAL
QVEQFFAPKL LQGKSILLTA GPTREAIDPV RYISNHSSGK MGFAIAAAAA AMGADVILVA
GPVHLPTPSG VKRIDVESTQ DMLSAVMQHV DTHDIFIGCA AVADYRIDQV AEDKIKKSAQ
DMQLALVRNP DILATVASHK PRPFTVGFAA ETKDVEHYAK DKLIRKKLDM IAANDVSNPA
QGFNTEQNAL KVIWANGQQD LPTTDKQILA GQLLTLIADQ LALLKDDK
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