| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4552 |
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| Symbol | |
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| ID | 6118918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5519977 |
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| End bp | 5521803 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636123 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001762897 |
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| Protein GI | 170728871 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00645821 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACAAG TGATAGACCA AACTCAATTA GATCCGCTTT CATTAAGTCT GCAGTCTGTT
TTCGGCTACC GGACATTCAG AGATGGGCAG AAAGAGGTGA TAGAGCAGAG TTGTTCGGGC
TATGACTGTT TGGTGATCAT GCCCACTGGT GGGGGGAAGA GTCTCTGTTA TCAATTGCCA
GCTTTGCAGT TGCCAGGGTT AACCCTTGTG GTGTCTCCGC TTATATCCTT GATGAAAGAT
CAAGTGGATA GCTTGATCCA GATGGGAGTG AGCGCGGCTT ATCTGAACTC CTCACAGCCA
AGAGAGGAGA GTGCTAGGAT TTTACAACAG ATGCACAGTG GTGAGCTTAA ACTGCTCTAT
GTATCGCCAG AGCGTTTGTT ACAGGGACAT TTTATCGATA GGCTTCATGA ACTGAACCTC
TCCCTTTTTG CTATCGATGA AGCACACTGT ATATCACAGT GGGGCCATGA CTTTAGACCT
GAATATGCCG CCTTGGGTAA GCTCAGAGAA GTTTTTCCAC ATGTACCTAT TATGGCGCTA
ACAGCGACTG CAGATCAGGC AACCCGAAAA GATATCTGTG ACAGGCTAAC CATTACCCCA
TATTCATTAT TAACCAGCTT TGATCGCCCC AATATTCGCT ATACGGTGGC GGAAAAGCTC
AATGCTGCTA ACCAGCTGCG CCAGTTTGTT GCAGCGCAAA ACGGTAATAG TGGCATTATC
TATTGCAGTA GCCGTCGACG TGTCGATGAG GTGGCTGAAC GCCTTAGACT TCAAGGTCAT
AATGCCGAGG CTTATCATGC TGGCAAAACC CAAGAGGAGC GGGCTGATGT TCAGGATCGA
TTCCTGAAAG ATCAACTCGA TATTGTGGTG GCGACCGTCG CTTTTGGTAT GGGGATCAAT
AAATCGAATG TGCGTTATGT TGTGCATTAC GATATTCCTA AAAGTGTTGA GTCTTACTAT
CAGGAGACTG GTCGAGCTGG ACGAGATGGA TTGGAGTCTG AGGCGCTACT GCTGTTTGAT
CCAGCCGATA TTGGCCGAGT ACGCCATCTT ATCGAGCAAT CAGAACCAGG TCCTCAGCAG
CAGGTCGAGT TTCATAAACT TAATACCATG GCGGCATTTG CCGAGGCACA AACCTGCCGG
CGTCAGGTGT TACTGCACTA TTTTGATGAG AGTGCCCTAG AGCCTTGTGG CAACTGTGAT
ATCTGCTTGG ATCCACCGAA AAAGTACAAT GGTATTCAAG ATGCTCAGAA GGTGTTGTCC
TGTATCTATC GCTTAGATCA ACGTTTTGGT ATTAACCACC TGATTGAGGT ACTTAGAGGG
TCTAAAGCTG CAACTGTGTT GGAGCGAGGT CATGATAAAT TATCAACTTG GGGAATTGGC
AAAGATAAGA GCCATGAGTA TTGGTTGAGT ATCATACGCC AGATCATTCA TCTTGGTTTT
GCCAGTCAGG ATATTACCCG TGGTTCCTCT GTGAAACTGA ATCCATCGGC GCGTTCGGTG
TTAAAGGGTG AGGTGGAGTT ATTGCTTGCA GAGCCAAGAA TGGTACTGCA AAGCACCACT
AAGCGTCGAG GTAGTAGTAC ACGAGCACCA CTTAATTACG ATCGTAAACT GTTTGCTCGC
CTTAAGCAGT TAAGACGCAA ACTGGCTGAA GAGTTAGATG TGCCACCCTA TCTGGTATTT
AACGATGCCA CTTTAGCTGA AATGGCGGCC ATACTGCCTA CAAGTCCTGG GGAGATGTTG
GCCGTAAACG GAGTTGGCGA GCGTAAGTTG ACCCGTTTTG GAGATGAGTT TCTTGATGAG
ATAAGCAACT ATTTAACCAA TAGTTAG
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| Protein sequence | MEQVIDQTQL DPLSLSLQSV FGYRTFRDGQ KEVIEQSCSG YDCLVIMPTG GGKSLCYQLP
ALQLPGLTLV VSPLISLMKD QVDSLIQMGV SAAYLNSSQP REESARILQQ MHSGELKLLY
VSPERLLQGH FIDRLHELNL SLFAIDEAHC ISQWGHDFRP EYAALGKLRE VFPHVPIMAL
TATADQATRK DICDRLTITP YSLLTSFDRP NIRYTVAEKL NAANQLRQFV AAQNGNSGII
YCSSRRRVDE VAERLRLQGH NAEAYHAGKT QEERADVQDR FLKDQLDIVV ATVAFGMGIN
KSNVRYVVHY DIPKSVESYY QETGRAGRDG LESEALLLFD PADIGRVRHL IEQSEPGPQQ
QVEFHKLNTM AAFAEAQTCR RQVLLHYFDE SALEPCGNCD ICLDPPKKYN GIQDAQKVLS
CIYRLDQRFG INHLIEVLRG SKAATVLERG HDKLSTWGIG KDKSHEYWLS IIRQIIHLGF
ASQDITRGSS VKLNPSARSV LKGEVELLLA EPRMVLQSTT KRRGSSTRAP LNYDRKLFAR
LKQLRRKLAE ELDVPPYLVF NDATLAEMAA ILPTSPGEML AVNGVGERKL TRFGDEFLDE
ISNYLTNS
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