| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4525 |
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| Symbol | |
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| ID | 6118891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5486517 |
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| End bp | 5489240 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641636096 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001762870 |
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| Protein GI | 170728844 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000405863 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000659986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTTTGGTA AATTACTGAC AAAATTATTT GGTAGTCGTA ACGATCGTAC ACTTAAATCT
CTTGGCAAAA TTGTCACTAA GATTAATGCT CTTGAAGATG ACTATGAAAA GTTAACCGAT
GACGAGTTAA AGTCTAAGAC ATCTGACTTT CGCAACCGTT TAGAATCAGG CGAAACTCTG
GATGATGTCA TGCCTGAAGC GTTTGCCGTT GTACGTGAAG CCTCTAAGCG TGTTTTTGAG
ATGCGTCACT TCGATGTGCA GATGCTTGGT GGTATGGTGC TCGACAGTAA CCGTATTGCC
GAGATGCGTA CCGGTGAAGG TAAAACATTA ACCGCCACAC TACCTGCTTA CCTTAATGGA
TTAACAGGTA AGGGTGTTCA CGTCATTACA GTTAACGATT ACTTGGCACG TCGTGATGCT
GAAAATAACC GTCCACTGTT TGAGTTTTTA GGACTTTCTG TTGGCATTAA CGTTGCGGGT
CTAGGCCAGC AAGAGAAGAA AGATGCCTAC AATGCCGATA TCACTTACGG CACCAATAAT
GAATTCGGCT TCGATTATCT ACGCGATAAC ATGGCTTTTT CACCAGCTGA ACGTGTTCAG
CGTCCGCTAC ACTACGCCCT AATCGATGAG GTCGATTCGA TCTTAATCGA TGAAGCACGA
ACTCCATTGA TCATCTCTGG CGCCGCCGAA GATAGTTCTG AGCTTTACAC TAAGATTAAT
ACCCTTATTC CGCACCTTAT TCGTCAAGAT AAAGAGGATA CGGAAGAGGA GATCGGTGAA
GGTGATTACT CCATCGACGA GAAAGCTAAA CAAGTTCATA TGACTGAACG CGGTCAGGAG
AAGGTAGAAG TCCTTCTGAC TGAACGTGGC ATGCTAGCTG AAGGTGATTC ACTCTATTCA
GCGGCCAACA TCTCTTTGCT TCACCATGTT AATGCGGCAC TTCGTGCGCA TACTCTGTTT
GAGAAAGATG TCGACTATAT TGTGCAAGAC AATGAAGTAA TTATTGTTGA TGAGCATACA
GGTCGTACAA TGCCTGGTCG TCGTTGGTCT GAAGGTCTTC ATCAAGCGGT AGAAGCAAAA
GAGGGAGTTC ATATTCAAAA TGAAAACCAA ACTTTAGCAT CAATCACTTT CCAGAATTTC
TTCCGCCAGT ATGACAAGTT AGCGGGTATG ACAGGTACAG CTGATACCGA AGCTTTCGAA
TTTCAACATA TCTATGGCTT AGATACGGTT GTGATCCCAA CTAACAGACC TATGGTGCGT
AAGGACCATG CGGATCTTGT TTACCTGACT CCAGATGAAA AGTATGCTGC GATTATTCAG
GATATCCAAG GCTGTCGTGA ACGCGGTCAG CCAGTGCTTG TGGGTACAGT TTCCATTGAA
CAGTCTGAGC TTCTTGCAAG ATTAATGAAG CAAGAAAAGA TCCCACACGA AGTACTAAAC
GCTAAGTTCC ATGAGCGTGA AGCTGACATT GTTGCCCAAG CTGGTCGAAC AGGTGCTGTC
ACTATTGCTA CCAACATGGC GGGTCGTGGT ACCGATATCG TATTGGGTGG CAATTGGAAC
ATGGAGATCG ATGCCCTTAG TAATCCAACT GATGAGCAGA AAGCCAAGAT TAAAGCCGAT
TGGCAAATAA GACACGATGA AGTTGTCGCT GCCGGTGGTT TACATATCTT AGGTACTGAG
CGACATGAGT CTCGCCGTAT CGATAACCAG TTACGTGGTC GTTCTGGTCG TCAAGGTGAT
GCAGGTTCAT CACGCTTCTA CTTATCAATG GAAGATAGCT TAATGCGTAT CTTCGCTTCA
GATAAAGTGA CTGGCATGAT GAAGAGACTG GGTATGGAAG AAGGCGAAGC CATCGAACAT
CCTTGGGTTT CACGTGCTAT TGAAAACGCA CAGCGTAAAG TAGAAGCACG TAACTTCGAT
ATCCGTAAGC AGCTACTTGA GTTTGATGAC GTGGCCAACG ATCAGCGTCA AGTGGTTTAC
GCTCAACGTA ATGAGCTGAT GGACGCGGAA AGTATTCAAG ATACTATTGT TAATATCCAA
GCTGACGTCG TTAATGGCCT TGTTGATCAA TATATTCCAC AGCAATCAGT GGAAGAGCTT
TGGGATGTTC CAGGTCTTGA AACTCGCTTA ACCCAAGAGT ATGGGCTGAA AATGCCAATA
CAGGAGTGGT TAGATACAGA GACAGATCTG CATGAAGAAA CCCTACGTGA ACGTATTGTT
GATACTTGGG TTAAGGCTTA TCAATCCAAA GAGGAGATGG TTGGCGAATC TGTATTACGT
CAATTTGAAA AAGCCGTCAT GTTGCAAACT CTTGACGGAC TTTGGAAAGA ACACTTAGCA
GCGATGGATC ATCTTCGTCA GGGAATTCAC TTGCGTGGCT ATGCGCAGAA GAATCCTAAG
CAAGAATATA AGCGTGAATC ATTTGAGCTT TTCCAGCAGA TGCTTGAGTC ATTAAAGCAT
GATGTCATTA GTGTGCTCTC TAAAGTACAG GTTCAGGCAC AATCTGATGT GGAAGAGATG
GAAGAGCGTC GTCGTCAAGA AGATGCCAAA ATCCAACGTG ATTACCAGCA TGCTGCAGCC
GAAGCACTCG TCGGTGCAGA GGAAGCAGAA GCACTAGCGG CTCACACACC TACAGTACGT
GAAGGTGAAA AGGTTGGACG TAATGATCCT TGCCCATGTG GCTCGGGTCG TAAATATAAG
CAGTGTCATG GAAAGCTAAC TTAA
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| Protein sequence | MFGKLLTKLF GSRNDRTLKS LGKIVTKINA LEDDYEKLTD DELKSKTSDF RNRLESGETL
DDVMPEAFAV VREASKRVFE MRHFDVQMLG GMVLDSNRIA EMRTGEGKTL TATLPAYLNG
LTGKGVHVIT VNDYLARRDA ENNRPLFEFL GLSVGINVAG LGQQEKKDAY NADITYGTNN
EFGFDYLRDN MAFSPAERVQ RPLHYALIDE VDSILIDEAR TPLIISGAAE DSSELYTKIN
TLIPHLIRQD KEDTEEEIGE GDYSIDEKAK QVHMTERGQE KVEVLLTERG MLAEGDSLYS
AANISLLHHV NAALRAHTLF EKDVDYIVQD NEVIIVDEHT GRTMPGRRWS EGLHQAVEAK
EGVHIQNENQ TLASITFQNF FRQYDKLAGM TGTADTEAFE FQHIYGLDTV VIPTNRPMVR
KDHADLVYLT PDEKYAAIIQ DIQGCRERGQ PVLVGTVSIE QSELLARLMK QEKIPHEVLN
AKFHEREADI VAQAGRTGAV TIATNMAGRG TDIVLGGNWN MEIDALSNPT DEQKAKIKAD
WQIRHDEVVA AGGLHILGTE RHESRRIDNQ LRGRSGRQGD AGSSRFYLSM EDSLMRIFAS
DKVTGMMKRL GMEEGEAIEH PWVSRAIENA QRKVEARNFD IRKQLLEFDD VANDQRQVVY
AQRNELMDAE SIQDTIVNIQ ADVVNGLVDQ YIPQQSVEEL WDVPGLETRL TQEYGLKMPI
QEWLDTETDL HEETLRERIV DTWVKAYQSK EEMVGESVLR QFEKAVMLQT LDGLWKEHLA
AMDHLRQGIH LRGYAQKNPK QEYKRESFEL FQQMLESLKH DVISVLSKVQ VQAQSDVEEM
EERRRQEDAK IQRDYQHAAA EALVGAEEAE ALAAHTPTVR EGEKVGRNDP CPCGSGRKYK
QCHGKLT
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