| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4491 |
|---|
| Symbol | |
|---|
| ID | 6118847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5432783 |
|---|
| End bp | 5433862 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641636053 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001762837 |
|---|
| Protein GI | 170728811 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3591] V8-like Glu-specific endopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCA ATCATAAAGT TATAGTCTGT AGTTGTATGG GAATATATAT GTCTTTGCTT
TTCGGTTCTG GAATAGCAAA TGCAGATACA TCCCTAATAA AAATATCAGA AGTAAAGGAG
AAGTCGGCAC CGAAAAATGT TGCAGCTTTA ATTGATAAGC AGTTAAAAAT GGATCAAGCC
ACACCAATGG AGTGGCCAGA ATATGTTGTC TCAAAGGGTG AACAAGAGGA GATAATCTCT
GGTGGTTCAG GCTCCGCTGA TAGTCAATTG GCACCTTTTG GAGCCAATGA TGATGCTAAA
GCTCTCTATC CTGAAGCTTG GAAAGCGATG GAGGAGATGG TGATCACCGA GGAGTACTCC
AGCAGTGATT ATGATGCCAA ATCTGCCGCT AAGCCCGATC TGTATACCGG TTACCCTGCC
AATAAATATT CCCAGTCTTG GAAATATCAC CCTTGGCGAA CCATGGGAAA ACTTTATTTC
AATAAACCGA GTGGTGGTAG CAGCTATTGC AGTGCATCTA TGCTGAAAAA CAATGTACTG
CTTACTGCTG CTCACTGTGT CTATAGTCGT GGAAGTGGCT GGCATTCAAA CTTAGTATTT
GCGCCTGCTG AGAGGTACGG TAACAAGCCG TACGGCCAGT ATAACTGGAC CAGTGCGATT
GTTCTTACTA ATTGGATTAA TGTCGGTAGC CGTCAATATG ATCTAGCACT AGTCCGATTA
AGTGGTAATC CAAATGGCAT GGTGGGTAAT TTGGGATATG CCTATGGTCA GTCATTTGAG
CAAAGTCTAT TCTCATTTGG TTATCCTGGG AATTTAGGTT CAGGTCAATA CAGTAATACT
TGTGCTGCTG AATCCTTTAA AGACGATACT GATGCCATTG GTATGGGTTG TAATATGACC
TATGGCGCAA GTGGCGGCCC TTGGTTAAGA AAGTTCACTC CATATGTGTC AGGTGGTAAT
CAGGCTAACT CTGTGGTCAG TGGCCCCTCC AAAAAGGGGA CTTTTGGTCA GAGTTTTGTG
GGGCCAAGAT TCACCAGTAA TAACTTTAGA GTACTCTGTA ATAGCTACGG CTGTTTATAA
|
|---|
| Protein sequence | MEINHKVIVC SCMGIYMSLL FGSGIANADT SLIKISEVKE KSAPKNVAAL IDKQLKMDQA
TPMEWPEYVV SKGEQEEIIS GGSGSADSQL APFGANDDAK ALYPEAWKAM EEMVITEEYS
SSDYDAKSAA KPDLYTGYPA NKYSQSWKYH PWRTMGKLYF NKPSGGSSYC SASMLKNNVL
LTAAHCVYSR GSGWHSNLVF APAERYGNKP YGQYNWTSAI VLTNWINVGS RQYDLALVRL
SGNPNGMVGN LGYAYGQSFE QSLFSFGYPG NLGSGQYSNT CAAESFKDDT DAIGMGCNMT
YGASGGPWLR KFTPYVSGGN QANSVVSGPS KKGTFGQSFV GPRFTSNNFR VLCNSYGCL
|
|---|
| |