Gene Swoo_4473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4473 
Symbol 
ID6118829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5409963 
End bp5410673 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content48% 
IMG OID641636035 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001762819 
Protein GI170728793 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAAA ATCTAGAGAG ACGGAGGTTC CTTAAAGGTC TAGGAGCCAG CTCTTTGATA 
TTAACACCGC TTGTTGGGTG TAGCTCGGTC AAAGAAAAGG AAGATACCAA CAAGCCGCAT
TATGTGATGG TTTTCGACCA GAACAAGTGC GTCGGGTGTG GTGAGTGTAA GGAAGCCTGT
AATAAGGCGA ATCACTTGCC AGAAGGTAAA TCTCGACTGC TAATGGAGGA GCAATCAAGC
GCCGTTGAAG GTCAACCATG TCCACACTGT GGTAAAACCG GTGATTGTGG CTGTCAGCGT
AAGTTTGTAC GGGTTTCATG TCAGCAATGT AAGAACGCAC CATGCGTCAC AGTTTGCCCA
ACAGGCGCTG CACATCGCGA TGAGAAGACT GGCATTGTGA CCATGGACGC AGCTAAATGT
GCGGGCTGTA AGTATTGTAT CGGTGCTTGC CCATACGATG CACGTTTCAT CAACAAAGAG
ACTGATGTGG CTGATAACTG CGACTTCTGC TTAAACAGCA AACTTGCCAT TGGTGAGCTA
CCTGCTTGTG TGCAGCAGTG CCGTTACGAT GCACTAATCT TTGGCGATGC AAACGATCCA
ACTTCATATG TGAGTAAGTT ATTGGCAGTT AAGGATTCAG TACGTATTAA GCCGGGCTTC
GGTACTGAGC CAAGCTTGCG TTACATCCCT ATTGTGAAGT TAGGAGTATA G
 
Protein sequence
MSENLERRRF LKGLGASSLI LTPLVGCSSV KEKEDTNKPH YVMVFDQNKC VGCGECKEAC 
NKANHLPEGK SRLLMEEQSS AVEGQPCPHC GKTGDCGCQR KFVRVSCQQC KNAPCVTVCP
TGAAHRDEKT GIVTMDAAKC AGCKYCIGAC PYDARFINKE TDVADNCDFC LNSKLAIGEL
PACVQQCRYD ALIFGDANDP TSYVSKLLAV KDSVRIKPGF GTEPSLRYIP IVKLGV