Gene Swoo_4471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4471 
Symbol 
ID6118827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5408292 
End bp5408780 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content51% 
IMG OID641636033 
ProductNosL family protein 
Protein accessionYP_001762817 
Protein GI170728791 
COG category[C] Energy production and conversion 
COG ID[COG4314] Predicted lipoprotein involved in nitrous oxide reduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC TGTTCTGTTT GTTATTCCTA CTACCTTTGC TCGCTGCCTG CAGCGACAGC 
GCCATAGATG CAAAGCCGCT GTCGGCCGAG GCCATTCATG AACATGACCG TTGCCACCTG
TGCGGCATGA TGATCACCAA ATACCCTGGC CCCAAAGGGC AAGTCCATCT CAAGGGACAG
TCGATAGTAC CTAAGTTCTG TTCGACTCGC GACATGTTTA ACTTTGCCCT GCAAGCTGAA
AACAAGCGCC AAATTGAAGC CCTATTTGTC CATGATCTTG CTGTCACGGA TTGGGCAGCC
CCAACAGACA ATGCCTTTAT CGATGCAACT CAAGCTTGGT ATGTCTACGG CACGAGCAAA
AAGGCGGTCA TGGGACCTGC GGTGGCCAGC TTTAAGCGCC AAGATGATGC GGTCAAGTTT
GCCACAGAGT TTGGTGGCGC TGTTTTCTCC TATGAACAGA TTGATATTGC GCTGTTGGCT
GGTGAGTAG
 
Protein sequence
MKKLFCLLFL LPLLAACSDS AIDAKPLSAE AIHEHDRCHL CGMMITKYPG PKGQVHLKGQ 
SIVPKFCSTR DMFNFALQAE NKRQIEALFV HDLAVTDWAA PTDNAFIDAT QAWYVYGTSK
KAVMGPAVAS FKRQDDAVKF ATEFGGAVFS YEQIDIALLA GE