Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4454 |
Symbol | |
ID | 6118810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5390502 |
End bp | 5391293 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641636017 |
Product | peptidylprolyl isomerase FKBP-type |
Protein accession | YP_001762801 |
Protein GI | 170728775 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAT TTAAGAGAAA TACCTTAGCC GTTATGACCA GCGTATCACT GCTTATCTCT GCAAATGCTA TGGCGAACAC AGAGATCAGC TCAGATGTTC AAAAAGAGTC TTACAGCATA GGTGCCTCAC TGGGTAAATA TATCTCTGGC CAGATCTATA GCCAGACCGA ACTCGGCGCT GAGGTTGATG TTGAGCTGGT GATTGAAGGC GTTGTCGATG CCCTTAAAAA CAAACCTCAG TTTTCAGATG AAGAGATCTT AACTTTCCTT AACCAGCGTG CCGAGCAGCT CAATACGGCA AGAGAAGCTG CGGAGGCCAA GATTGCGTTG GAAAACCTTA CCGCTGGTAA TAAGTACCTT ACCGAAAACA AAGCAAAAGA TGGTGTTAAC GAGACAGCTT CAGGTCTGCA GTATGAGGTT ATCTCTGAAG GTGAAGGGCG TAAGCCAAAT CCACAGGATG TGGTTACCGT GCACTACAAA GGTTTCTTAG TCGACGGTAC ACCATTTGAT GACTCTTATG AGCGTAACGA GCCAAACCGC TTTGCTTTAA TGAGTGTGAT TGAGGGTTGG CAAGAGGGGA TCCCCTTGAT GAATGAGGGC TCTAAGTACA AGTTTGCTAT CCCAGCAGCA CTTGCCTATG GCGAGAAGCA AGTTGGCATT ATCCCGCCGA GCTCAACATT GGTGTTTGAA GTGGAGCTAG TAAAAGTTGA AGCCCCAGGT GAAGGCGCAC ATGGCATGGG ACTAAGTGGT ATGGGAATGG GCGGCATGAT GGGACAGGGT AATCCTCATT AA
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Protein sequence | MKTFKRNTLA VMTSVSLLIS ANAMANTEIS SDVQKESYSI GASLGKYISG QIYSQTELGA EVDVELVIEG VVDALKNKPQ FSDEEILTFL NQRAEQLNTA REAAEAKIAL ENLTAGNKYL TENKAKDGVN ETASGLQYEV ISEGEGRKPN PQDVVTVHYK GFLVDGTPFD DSYERNEPNR FALMSVIEGW QEGIPLMNEG SKYKFAIPAA LAYGEKQVGI IPPSSTLVFE VELVKVEAPG EGAHGMGLSG MGMGGMMGQG NPH
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