Gene Swoo_4445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4445 
Symbolfre 
ID6118801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5381702 
End bp5382412 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content47% 
IMG OID641636008 
ProductFMN reductase 
Protein accessionYP_001762792 
Protein GI170728766 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA TTCGTTGTCA GATAGAGAAA GTGACCCCAT TTAATGATGC GGTCTACCAA 
ATCATTCTTA AGCCTGAAAC CGCTTTCCAA TTTAAAGCGG GCCAATATCT TTGTGTCGTT
ATGGGAGAAA AGGACAAGCG TCCATTCTCT ATCGCATCCG CTCCAGACTC AGAACATATC
GAATTACACA TAGGTGCAGC GGTTAGCGAA AGCTACCCAA TGCAGGTTGT AGAGCGTATG
AAGGAGTGCA TGCAAAATGG TGCTTATATC GATGTTGAAG TCCCAGGCGG AGAAGCGCAC
CTACGCCACG AGAGTGAACG ACCACGTTTG ATGATCGCCG GAGGCACAGG CTTCTCCTAT
ATCAAGAGTA TTATCGAACA CCAGATAGCC TTAGATCAGA AAATTCCTAC CACCCTCTAT
TGGGGATGCC GCAATCAAGA TGCCATGTAC TACGAAGAGA TTGCAAGGCA GTGGCATGAT
GCGCACCCGT GGATGCAATT TGTCCCTGTA ATTGAGCAAG CTGGTGATGA TTGGAAAGGA
AAAGAGGCCA ACCTACTGGA TCAGATCCGC GCTGATTTTG TCAGCTTAAA TGGATACGAC
ATCTATATCG CAGGTCGTTT CGATATGGTC GGCGCCGCAC GTGAAGTGTT CCGCTCAATT
GGTGTCGAAG AGGATCACCT CTATGGTGAT GCCTTTGCAT TTATCAAGTA G
 
Protein sequence
MNTIRCQIEK VTPFNDAVYQ IILKPETAFQ FKAGQYLCVV MGEKDKRPFS IASAPDSEHI 
ELHIGAAVSE SYPMQVVERM KECMQNGAYI DVEVPGGEAH LRHESERPRL MIAGGTGFSY
IKSIIEHQIA LDQKIPTTLY WGCRNQDAMY YEEIARQWHD AHPWMQFVPV IEQAGDDWKG
KEANLLDQIR ADFVSLNGYD IYIAGRFDMV GAAREVFRSI GVEEDHLYGD AFAFIK