Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4442 |
Symbol | |
ID | 6118798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5377997 |
End bp | 5378971 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641636005 |
Product | response regulator receiver modulated CheW protein |
Protein accession | YP_001762789 |
Protein GI | 170728763 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAT TAAAGAAATC GGAAATTCTG ACTGAAAGTG GAACCAATGA ACTTGAAATT ATTGAGTTTC ATCTACATAA GACATTAGCG GGAGGTGGGC ATAAAGTCTG CCATTATGGG ATCAATGTGG CCAAGGTTCG TGAGGTTATC AGAGTGCCTG ATACGTCAGA TTATCCAAAT GCGCAATCCC ATATGGTGGG GGTCTTCTCT CTGCGGGATA ACCTTATTCC TTTAGTGGAT CTTGCTGGAT GGCTTGGGAT CCCGACTCAA AACGATTTAG AGCACAAAGT TGTAATAGTG ACCGATTTTA ATCGAATGAT TAATGGTTTC TTAATTGACA GTGTTCGCAG TATTCATCGT GTTTCATGGG AGCAGGTTGA GTCTCCCAGC CAATTTTTGG AAGCGGGGGA GCAGGACTGC GTTGTTGCAG TGGTTCGCCG TGAAGGACAC CTTATCATGG TGCTGGATTT TGAAAAGATC ATCGCTGATA TCAATCCTGA ACTGAGCATG GATAAATATG ATGTGACCCT TGATAAGACT GTGGTGATTA ATGACGAGAT GCTAGCTAAG CGTGAGGCTA AAACCATACT GATCGTCGAT GACTCAGCCT TTATTCGTAA GATGATAGAA AATACCCTTC GAACAGCAGG CTATAACATT ATCACCGCCA AAGATGGTGG TGATGCGTTG GAGATGTTGG AGGAGTTTGA GCGACTCGCA GAGGAAGCTG GTGCCTCAGT CAGTGAGATG GTGAGTGGGA TTATTTCGGA TGTGGAGATG CCAAGAATGG ATGGATTACA TCTGCTTAAG CGTCTCAGAG ACAAGCCGTC CTATAAGACT ATGCCGATTG TTATGTTCTC ATCACTGATG AGTGAAGATA ACCGAGGAAA AGCGTTGGCC TTAGGAGCCA ATGACACAAT CACTAAGCCG GAAATTGGCC GCATGGTTAC TATGGTCGAT AGCTTTGTTC TTTAG
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Protein sequence | MSELKKSEIL TESGTNELEI IEFHLHKTLA GGGHKVCHYG INVAKVREVI RVPDTSDYPN AQSHMVGVFS LRDNLIPLVD LAGWLGIPTQ NDLEHKVVIV TDFNRMINGF LIDSVRSIHR VSWEQVESPS QFLEAGEQDC VVAVVRREGH LIMVLDFEKI IADINPELSM DKYDVTLDKT VVINDEMLAK REAKTILIVD DSAFIRKMIE NTLRTAGYNI ITAKDGGDAL EMLEEFERLA EEAGASVSEM VSGIISDVEM PRMDGLHLLK RLRDKPSYKT MPIVMFSSLM SEDNRGKALA LGANDTITKP EIGRMVTMVD SFVL
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