| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4396 |
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| Symbol | |
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| ID | 6118751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5325923 |
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| End bp | 5326657 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641635958 |
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| Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
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| Protein accession | YP_001762743 |
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| Protein GI | 170728717 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0388] Predicted amidohydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0171854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGTTTTAC CTGAATGCTG TTTGCTGTTT GGTGGTCATG AGAGCCACCA GCTCGAATAT
GCTGGTGAGG CAAGCGCTGA AACGACTGAG TTAAAAACTG CCCTGTCTGA GCTAGCTGCA
AGGTATGATA TCTATCTAGT GGCTGGAACA ATTCCTGTAC GTTCAGAGGA TGGACGTGTC
TATAGTCGAA CTTACCTTTT TGATAATACG GGTAGTACCT TAGGTGACTA CGATAAGCTA
CACCTGTTTG ATGTAGATGT TGCCGATGGA ACCAAACAGT ACCGGGAGAG TGATACCTTT
TGTCCAGGCG AGAAGATCAC CGTTATAGAT ACGCCATTTG GAAAGTTAGG TTTAGCGATT
TGCTATGATC TTAGATTCCC AGATCTGTTT AGAGCCATGC GTTTGGCTGG GGCTGAGTTG
ATTGCTCTGC CTTCCGCTTT TACTAAGGTG ACAGGTGAGG CACATTGGCA ACCACTGATT
CAGGCAAGGG CGATAGAGAC CCAATGCTTT ATTCTGGCAG CGGCCCAGTG GGGACAGCAT
AATCAAGGCA GTCGTGAGAC CTGGGGACAG AGTATGATTG TCGATCCTTG GGGGCGAGTT
CAGGCTGAAA AAAGAGAGGA GTGTGGCTGG GTTCAGGCTA CACTGGACAG GAGCGAGCAG
GATAAGATCC GCAAGCATAT CCCTGTAGCT GGTCATAATC GATTTTCAGA GCCCAAGTTA
CGAAAAAGCA ATTAG
|
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| Protein sequence | MVLPECCLLF GGHESHQLEY AGEASAETTE LKTALSELAA RYDIYLVAGT IPVRSEDGRV
YSRTYLFDNT GSTLGDYDKL HLFDVDVADG TKQYRESDTF CPGEKITVID TPFGKLGLAI
CYDLRFPDLF RAMRLAGAEL IALPSAFTKV TGEAHWQPLI QARAIETQCF ILAAAQWGQH
NQGSRETWGQ SMIVDPWGRV QAEKREECGW VQATLDRSEQ DKIRKHIPVA GHNRFSEPKL
RKSN
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