Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4391 |
Symbol | |
ID | 6118746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5319483 |
End bp | 5320637 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641635953 |
Product | ABC-2 type transporter |
Protein accession | YP_001762738 |
Protein GI | 170728712 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.567246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCTG TTCAAACCAT GACCTTCTGG CAACTTGTGC TATCTGAGTT AAAAGCGATT GTGTCGGATA AAGCTATCGC AGTGACCCTG TTCGGTGGTG TGCTGTTTTA CTCGGTTCTC TATCCTTTGC CTTATCTGCA TCAGGTACCG ACTGAGCAGC AGTTGGTTGT GGTGGATCTC GACCACTCCT CATTGAGTCG TCGTTTAATT CGTCACGCTG ATGCAAGCCC TAAAATAAGT GTAATAGGCC AAGTGGGGAG TATCACTGAA GCGAAAACCT GGATTGAGTC GGGTCGCGCT CATGGGCTTT TAGTTATTCC TGAAGGGTTT AGACGAGATC TACTGTTAGG TAAGGGAGTG ACCTTAAGTT ATGGCGGCGA TGCCAGTTAT TTCTTGATCT ATTCGGCAGT GGCTGAGGGC TTAGTGACGG CTGGTATGGA TGCAGGCAAG CAGGTACAGT TGCTCGGTAT GTTAGCCAAA GGTGAGGCTC CAGAGCAGGC GGCTCAGAGT CTTAACTCTG TTAAGGTGAA CAGTGTACCC GCATTTAACC CAAGCCTAGG TTATACCCCA TATGTCGTCC CTGGACTCTT TTTGTTGATC TTGCATCAAA CTTTGCTGAT TGGTACGGGA ATACTGGGGG CAGGCCAATG GAAAGCGAGA GGATATTGGA GTGAGTTATC TCCTCTGCAG CTTATTTCAG GTCGTATCTC AGCATTTATG CTGATCTATC TATTTTTTAG CAGCTTTTAT GTGGGCTTCT GCTTTTATTG GTACCAGGTG AGTATTCAGG CCAGTTTGGG CTTGGTCGCA CTATTCCTAT TGCCCTTTTT ACTGGCGACC AGCGTAGCGG GAATCGCACT CAGTTGCTTA TTTGTACGCC GCGATCTGCC AACTCAAGTT TTGTTGTTGG CCTCTATGCC CATTATGTTT GTTTCAGGTT TTGTTTGGCC TCTGGCATTG ATCCCTGAAC CTTTGATCTG GATATCTCAG GCTATTCCCG CCGTTCCCGC GATTATGGGG ATGTTGGAGC TTAATCAGAT GGGAGCATCA TGGTCGAGTA TTATGCCTAA GTGGCTGCAG TTATGGGGCC TGTTCGCAGT GTTCTTTTTA CTTGCTCTTT ATGGTGTTTC GAGAAGATTG AAAGAGAGTC GATAA
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Protein sequence | MKPVQTMTFW QLVLSELKAI VSDKAIAVTL FGGVLFYSVL YPLPYLHQVP TEQQLVVVDL DHSSLSRRLI RHADASPKIS VIGQVGSITE AKTWIESGRA HGLLVIPEGF RRDLLLGKGV TLSYGGDASY FLIYSAVAEG LVTAGMDAGK QVQLLGMLAK GEAPEQAAQS LNSVKVNSVP AFNPSLGYTP YVVPGLFLLI LHQTLLIGTG ILGAGQWKAR GYWSELSPLQ LISGRISAFM LIYLFFSSFY VGFCFYWYQV SIQASLGLVA LFLLPFLLAT SVAGIALSCL FVRRDLPTQV LLLASMPIMF VSGFVWPLAL IPEPLIWISQ AIPAVPAIMG MLELNQMGAS WSSIMPKWLQ LWGLFAVFFL LALYGVSRRL KESR
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