Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4332 |
Symbol | |
ID | 6118687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5245575 |
End bp | 5246372 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641635895 |
Product | ABC-3 protein |
Protein accession | YP_001762680 |
Protein GI | 170728654 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.364125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGATA CTGACTTACT CTCAATCCTA TTCCCCGCCT TTGTTGCGGG GATTTTGGTT TTGTCTACCC ATGTGGTGCT TGGTCAGCAA GTGTTGAAAC GTGGCATTAT CTTTATCGAT CTGGCTATCG CTCAAGTTGC AGCTTTAGGT GCAATTGTGG CTCACCTTAA CCACGATATT GAACATTTGC CCTATTCTCA CGTGTGGATG CCTGCACTAT TTGCCCTTGC TGGCGCTGGA TTTATCGCTT GGTTGTCGAA GCGAATGGCT GATGAGTTAG AAGCAATTAT TGGCTGTTTC TATGTGTTAG CGGCTGTGGG TGCGATGTTA TTGCTCTCAA ATGATCCCCA TGGAGCGGAG ATGTTGAAGC AACTGATGTC GGGTCAGATC CTCTGGGTTA ACTGGTCTCA ACTTATACTG CCAGCGAGTG TTTCTGCCTG TATTTTACTG CTTATCTCCA TTAAACCTGC TCTGCTAGAT GGGCGTGGTT TCTATATCAT GTTTGCTTTA GTGATCACTC TTTCTGTTGA GTTAGTCGGG GTCTATTTAG TCTTTAGTAC TTTGATTTTG CCAGCTTTGG CAGTGAATAA ATACCACGCT AGATTCAAGT TACCTGCCGC TTATGCTGTC GGACTTGTTG GCTATATCTC AGGTTTAGTG CTGTCTGCGA GTTTCGATCT TCCCAGTGGG GCGGCAATTG TTGCCACTTT GGCGATAAGT ACGATTCTGT TTAGACTCGT TTTGGGTAGG AAAGCGCAGC CACAGAAAAG AGACCAAGAA AAATTAATCC GGAATTAA
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Protein sequence | MFDTDLLSIL FPAFVAGILV LSTHVVLGQQ VLKRGIIFID LAIAQVAALG AIVAHLNHDI EHLPYSHVWM PALFALAGAG FIAWLSKRMA DELEAIIGCF YVLAAVGAML LLSNDPHGAE MLKQLMSGQI LWVNWSQLIL PASVSACILL LISIKPALLD GRGFYIMFAL VITLSVELVG VYLVFSTLIL PALAVNKYHA RFKLPAAYAV GLVGYISGLV LSASFDLPSG AAIVATLAIS TILFRLVLGR KAQPQKRDQE KLIRN
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