| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4312 |
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| Symbol | |
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| ID | 6118667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5217940 |
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| End bp | 5219508 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635875 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001762660 |
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| Protein GI | 170728634 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0365269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTAA TTGGGTTTAG CAAAGTATCA AGGTATATCG AGCGAGTTAT GTTTTGGAGT
GTGCCGTTAT TAGTGCTCTG TGCAGTACTA TTGCTATCGG CTTGTGGGGG GCGTGGCTCA
GCAAATCAAG CATCGATAGA CAAGGCACCC GTTGAGCTTG TTAACCTAAG GACGAATATT
GAGATAGCAG GTGTTGATTA TAAGCCCATA TTAGATGAGC TTGATTTATC TACCTACTGG
ATAGCGACAA GTGAGCCTAC TGAGCCTATG TTGTCAGCGC TTAATACTCA ACTGGCTAGC
TTGTCAGGTA TCTTTGCTGA GCAGTTCTCC CTTGAAACTT TTGCGATGGG GATCCAGTTG
GATCCTTTGC AAGAGCAAGC CATCATCATT GATGCTTCAG CCTCTAAATT AGGCCAAAGC
CGGTTGATAG TCACATTAGC TGGTAGCTTG CCAGACGAGG AGTTGAGTCA ACCGCTGGCA
GCAGGTATCT ATTTAGCATT AAGGCGAGCA CATCAAGCTG ATGCAGATCT ACTTGAAAAG
CTCGTCAGTC ATGGTCTAGC ACTGAATTTT GTTGAGTCAG AGCTTAAACC CAAAGTGCTT
TATCAAGATG TTCAAATATT GAAACCAGCA CTTAATGATG CGATAGACCT CGCTAAAAAG
GCGCTCAAGT CGGGGGATGA CCTCAAAGCT TGGTTTGATC CTGTAACTCA TGATTTTATA
GATAACGGTA CTGGATTGAA GTTAGCTTAC TACCTGACAA GTCAGCACTT TAACCGATAC
CCTGGCAGCA GCGCAGCGAA TACTTTCTCA CTTGATGCTG ACCTATTTAG CGTCAACTTA
GCTGCACCCG TTAAGCTCTC TCATAAGTCT GCGCAATATG TCAGAACTAG TGATGTAGCT
GATCAAGTGG GTGTGAGTGA GTTGACAAGG CAGGCCAGTG ATTTCTTAGG CAGCTATTTT
TTAGAGGGGT GGAATCAAGA GAAGCTTATC GCATTAACCT TCGATGATGG GCCATCAAGC
TATACGACTC AAATATTAGA TATTCTCTCC CAGAGAAAGG TCAAAGCTAG CTTCTTCTGG
ATGGGATTGA ACATGCAAAC GAATCAATCG ATTATGGAAA GGGCATTGAG TGAGGGACAC
ACACTTGCCA ACCATAGCTG GAATCATCCA CATGGGCGTG AGTTAAGTGA TCAGCAGCTT
TGGCAAGAGC AGGTTTTGAA GACAAATGAG CTGTTTCAAG ACTCACTTGG GATCACACCG
CGATTTTATC GCCCTCCATA CGGTGAAATA AGCGATGAGC AAATAGCCTT TCTTGATGAG
AAGGGGATGA AAGTTATCTT GTGGTCGGTA GATACTCGAG ATTGGAACTC GCCCATTGTT
ACCTCCAAAA ATATCAGCGA CGTGATGATT AATAACCATC ATCCAGAAGT GATTAACTTG
ATGCATGATG CGGGCGGCGA TAGGCAAAGT ACCGTTAATT CACTACCAAA GATTATCGAT
TATTACCGTA GCCAAGGTTA CCGTTTCGTT AACTTACAAG AGATGCTCGG CATAAGCGAT
AGAAGCTAG
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| Protein sequence | MALIGFSKVS RYIERVMFWS VPLLVLCAVL LLSACGGRGS ANQASIDKAP VELVNLRTNI
EIAGVDYKPI LDELDLSTYW IATSEPTEPM LSALNTQLAS LSGIFAEQFS LETFAMGIQL
DPLQEQAIII DASASKLGQS RLIVTLAGSL PDEELSQPLA AGIYLALRRA HQADADLLEK
LVSHGLALNF VESELKPKVL YQDVQILKPA LNDAIDLAKK ALKSGDDLKA WFDPVTHDFI
DNGTGLKLAY YLTSQHFNRY PGSSAANTFS LDADLFSVNL AAPVKLSHKS AQYVRTSDVA
DQVGVSELTR QASDFLGSYF LEGWNQEKLI ALTFDDGPSS YTTQILDILS QRKVKASFFW
MGLNMQTNQS IMERALSEGH TLANHSWNHP HGRELSDQQL WQEQVLKTNE LFQDSLGITP
RFYRPPYGEI SDEQIAFLDE KGMKVILWSV DTRDWNSPIV TSKNISDVMI NNHHPEVINL
MHDAGGDRQS TVNSLPKIID YYRSQGYRFV NLQEMLGISD RS
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