| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4310 |
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| Symbol | |
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| ID | 6118665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5215531 |
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| End bp | 5216886 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641635874 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001762659 |
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| Protein GI | 170728633 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGACA GACACGGGCT GCTTACCCAG CCAATTGGTC GTGTACTGCT AAATATGAGC
CTCCCGAACC TGATTGGTAT CTTAACCATT CTGGGGTTCA GTCTCGTCGA CACGTTTTTT
ATCAGCCAGT TAGGGACAGA ATCTCTGGCG GCAATAAGCT TTACTTTCCC AGTAACCTTA
GTGATATCCA GTATCGCCAT CGGCATAGGG GCTGGGGTAT CAACCAATTT AGGCCGGCTG
ATTGGCAGTG GCCAAGCGCC AAAAGCTAAG GTGTTTCTAC ACGACTCTCT GCTGCTGACC
TTCTTCTTGA CCGCGTTTAT CTCGCTACTT GGAAGTCTCT GTATCGGACC GCTATTTAGC
CTGCTCGGCG CTAACAGTGA GAGTCTGCCG CTCATCTATG ACTATATGTT TATCTGGTAC
TTAGGGGCGC CACTACTGGT GCTGCTTATG GTGGGTAATC AGGGGCTTCG CGCCACAGGC
GATACCAAGT CGCCTGCTAA AATTATGATG TTAGCCGCAC TGATTAACTT AATTCTAGAT
CCGCTGCTTA TCTTCGGCAT TGGGCCATTT CCCCGTTTAG AGATTGAAGG AGCGGCTATT
GCAACGGTGA TCTCTTGGAT AGTGGCACTA TCACTTTCAA GCTACCTACT TATCTTTAAA
CGTCATCTGG TGGAGTTTGC CGAGTTCAAT ATGACAAGGT TCAGATCTAA CTGGAGAAAG
CTGGCCCATA TTGCTCAGCC TGCCGCCTTG ATGAATCTAA TGAATCCGCT GGCCAATGCC
ATCATTATGG CCATGTTAGC CCGTATCGAT CATGGCGCAG TAGCCGCCTT TGGTGCGGGA
ACACGTCTCG AGTCTGTGCT GTTAATTGTG GTGATGGCAC TGTCATCGAG CTTAGTGCCT
TTTATTGCGC AAAACTTAGG GGCGGGTCAA ACCGAACGTG CCCGAGACGC CCTACTGTTT
TCACTCAAGT TTGTACTAAT ATTTCAGACC TTACTCTACC TGCCGCTCTA CTTCTTTGCG
GGCTCTATTG CCCAGCTCTT TAGTAGCGAT CCCCAGGTCA TTGAGTGGTT AACCTTCTAT
ATCGTTATGC TCCCGGCGGC TTATGGTCCC TTGGGCATAG TGATTTTACT GGCCACCTCA
CTGAACGCTT ATCACAGGCC GATGTGCTCA CTGGTACTGA ACGTGTGTCG CCTCTTCCTC
ATTATGCTGC CACTGGCCGC ATTAGGCTCA TACCTTGGGG GGGTTAAAGG CTTATTGATG
GCACTTCCCA TCACTAATAC CTGTATTGGT ATCGCCTGCT ATATCTTGGC GACGAAAATC
TCTGAGCCAC CAAAAACTGA GCCGTCAACA GCCTAA
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| Protein sequence | MRDRHGLLTQ PIGRVLLNMS LPNLIGILTI LGFSLVDTFF ISQLGTESLA AISFTFPVTL
VISSIAIGIG AGVSTNLGRL IGSGQAPKAK VFLHDSLLLT FFLTAFISLL GSLCIGPLFS
LLGANSESLP LIYDYMFIWY LGAPLLVLLM VGNQGLRATG DTKSPAKIMM LAALINLILD
PLLIFGIGPF PRLEIEGAAI ATVISWIVAL SLSSYLLIFK RHLVEFAEFN MTRFRSNWRK
LAHIAQPAAL MNLMNPLANA IIMAMLARID HGAVAAFGAG TRLESVLLIV VMALSSSLVP
FIAQNLGAGQ TERARDALLF SLKFVLIFQT LLYLPLYFFA GSIAQLFSSD PQVIEWLTFY
IVMLPAAYGP LGIVILLATS LNAYHRPMCS LVLNVCRLFL IMLPLAALGS YLGGVKGLLM
ALPITNTCIG IACYILATKI SEPPKTEPST A
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