| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4307 |
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| Symbol | |
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| ID | 6118662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5212069 |
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| End bp | 5213028 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641635871 |
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| Product | integron integrase |
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| Protein accession | YP_001762656 |
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| Protein GI | 170728630 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGCTT CGAGTCCATT TTTAGAGTCT GTCAGGCAAG ATATTCGGTT GCGAGGTTAT
AGTCTGCGAA CGGAGAAAGC CTATCTATAT TGGATCAAGC GTTACATTTT ATTTCACAAT
AAAGCCCATC CAGAAACGCT GTCTGCTGAC GATGTTAAAA GCTTTTTGAC TTGGTTGGCA
ACTACCCAAA ATGTCGCTGT TAATACCCAG AAGGTTGCGC TTAACTCATT AGTTTTTTTA
TACCATCAAT ATCTCAAAAT TGAGTTAGGA GATTTAGGTT TCACTTTAGC TACAAAACAG
CGCACATTAC CGACGGTTTT ATCGCCAAAA GAGATTGCTC AAATTTTGTC AAATATGAAT
GGAACTGCAA AATTTGTTAT AGAGATGCTT TATGGTAGCG GAATGAGAGT CAATGAGTGT
TTAAGATTGA GAGTGCAAGA TATCAATATC GAAAACCTCT CATTAACGAT TCGAGATGGG
AAGGGAAATA AGGACAGGCA GACCCTACTG AGCCGATCAT GTTCTCATTT ACTTACCGCC
TATATTGATA GTGCTATAGA ACTACAAAGT AGTGATAATG AAAATGGATT TGGCCCATCA
CTCCCATACT CGTTAGGAAA AAAGTACCCC AAGGCTTTCC AACAACCTGC TTGGATGTTT
GTGTTTCCCT CAAACAACAT CAGTGAACAC CCTGTGACAA AAATGCCCTG TAGGCACCAC
CGCCATGACA GTACCATAAG AAAAGCACTT CAAAATGCAG TCGGAATGAC CAACATAATG
AAGAAAGTTA ACTGTCATAC ATTTAGGCAT TCGTTTGCAA CACACCTTTT GCAAACAGGG
ACTGACATAA GAACCGTACA AGAGTTACTC GGGCATAACG ATCTGAATAC CACCAAGATA
TATACTCATG TTTTAGGGCA ACACTATGCG GGAACAACTA GCCCGATGGA TGATCTGTAA
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| Protein sequence | MKASSPFLES VRQDIRLRGY SLRTEKAYLY WIKRYILFHN KAHPETLSAD DVKSFLTWLA
TTQNVAVNTQ KVALNSLVFL YHQYLKIELG DLGFTLATKQ RTLPTVLSPK EIAQILSNMN
GTAKFVIEML YGSGMRVNEC LRLRVQDINI ENLSLTIRDG KGNKDRQTLL SRSCSHLLTA
YIDSAIELQS SDNENGFGPS LPYSLGKKYP KAFQQPAWMF VFPSNNISEH PVTKMPCRHH
RHDSTIRKAL QNAVGMTNIM KKVNCHTFRH SFATHLLQTG TDIRTVQELL GHNDLNTTKI
YTHVLGQHYA GTTSPMDDL
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