| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4258 |
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| Symbol | |
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| ID | 6118613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5160825 |
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| End bp | 5161808 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635824 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_001762609 |
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| Protein GI | 170728583 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.795414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00375381 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCGCCT CTAAACAGTC CAATCTACTC AAGTTACCTT CTATGCATTC AACGACAGAA
AAACAGGCAA GCTCCTCATT TAAGGGCAAC GCACTGGCAG CATTTTCATT TTTGCTATGG
GGCTTGATGC CACTCTATTA TCAATATCTA CCAAATGCAG ATATTAACGA GCTGCTGGCG
TTTAGAATTC TATTCTCCGT CCCCTTTATG GCATTGGTAT TTCTGCTTTT AGGGCGAACT
ATGCCCTCAA TGTCAGCACT GAAAGCGGAC AAAAGATCGG TCGCTTTATG CGGCTTGGCA
TCACTTATCA TGTGTGTCTC TTGGTATAGC TTCACGTGGG CTATCACCCA TGGACAAGTT
TTGGCTGCAA GCTTAGGCTT TTTTATCAAC CCTCTGTTTG CGATTGGCTT AGGTGTTCTA
TTTCTTGGGG ATAAACTCAC CTCAGCACAA AAGCTCGCTG TAGTATTAGG CACCTGCGGT
ATCAGCTACA TGGTCTATAG CTATGGTGAG CTCCCTTGGC TTGCACTAAG CATGGGCAGT
TTTTTTGCGC TCTACGGACT ATGCAAAAAG TTTATCCGTT TCGACTCTCT CACTTCGGTA
ACACTTGAAG CTATCTGGCT AATGCCTTTT GCAGCTATCT ACCTCATCTG GCTCTGGAGC
TCAGATCAAA GTGTCGCCAT CTCTTCAGCG CTTTCAGGAG AGGTTTCAGT TCTGCTGCTC
TACATGGGCA CCGCGCCGTT AACTTTGCTA CCTCTGGTCT TCTTTGCATT GGCAGTCAGA
GCCACCAGCC TATCTATGAT AGGTTTGATG CAGTATATCG AGCCGAGCCT GCACTTCCTG
CTGGCTGTTA TTCTATTTAA TGAACATTTT GATCAAGTAA AAGCGGTCAG TTTTGCGCTG
ATCTGGACCG GACTTCTACT CTGCTCATTA GAAGCCCTCC CGACCTTAAG GCATAAACTG
TTAGCTAACA GACACTCAAG TTAA
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| Protein sequence | MRASKQSNLL KLPSMHSTTE KQASSSFKGN ALAAFSFLLW GLMPLYYQYL PNADINELLA
FRILFSVPFM ALVFLLLGRT MPSMSALKAD KRSVALCGLA SLIMCVSWYS FTWAITHGQV
LAASLGFFIN PLFAIGLGVL FLGDKLTSAQ KLAVVLGTCG ISYMVYSYGE LPWLALSMGS
FFALYGLCKK FIRFDSLTSV TLEAIWLMPF AAIYLIWLWS SDQSVAISSA LSGEVSVLLL
YMGTAPLTLL PLVFFALAVR ATSLSMIGLM QYIEPSLHFL LAVILFNEHF DQVKAVSFAL
IWTGLLLCSL EALPTLRHKL LANRHSS
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