Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4254 |
Symbol | |
ID | 6118609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5153473 |
End bp | 5155662 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641635820 |
Product | decaheme cytochrome c |
Protein accession | YP_001762605 |
Protein GI | 170728579 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.353597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000280036 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGATAAAAA CAAATAAGAA AAAAATATGG TTAGTACTCG CTGCAGCTAT GACTATGGGT GTAGTGGGAT GTTCGGGTGA TGATGGAAAA GATGGTAGTG ATGGTGAGAA TGGCGGTAAT GGCAATGATG GTGATGCGGG AACGTCCGGT TTACATATCG ATATGGCCAA TGAAGCGATT GCAACTATCA CTAATGCGAC ATACGCAGAA GGCATAATCA CGGTTGATTT TGATCTGGAA AATAAACAAG GAGTGGGATT ATTTGGCCTA AGTGGGACCA ATGAATACCA TGACTTCCGT TTCTCTTTAG CTCAGCTTGA AACTGATACA GGCAGTGAAC TAAAGCAGTG GATCTCTCTG TTAAATGAAA CCACCAATGA TACTGGCACG ACGTTCGAGC AAGGCTTTGA AAAAATCAAA GACTGCAGTG AATGTTTAGT CGATAACAAA GATGGTACTT ATACCTACAA CTTTAAAACC AATCTCGTGT CAGCGACTGA TGCGGCTGGG GTAGTATTTG ATCCGGCGTT AACCCAAAGG ATCGCGATAG AGATGCAGTT TGAGTATGCT TCTGGTCATG AGTTGGCGGA AAACGCTCAT TATGATTGGA TCCCTGCAAC AAACTCAATT GAAGGGATAG AGAAGCGTGA GTTAGTGACG CTGGAAACCT GCTACACCTG TCATCAGCCA GATAGTTTAG AGGCTCATGG TGGTCGTCGT CTGGATCTTG AGAACTGTCA ATCTTGCCAT AATGGTATTG TGACTGACCC TAATGCTGTA TCGGTTGAGT TAGGGCATAT GGTGCATGCC ATTCACATGG GGCCAGAGCG TGAAGGTAAA GACGCTGAGG GCAATGTTGT GAAGATGCCA TACACCATAG CGGGTTATGG TGGCGATCAC GCCTTTGATT ATCCAGCTTT CCCGACTAAA CCATTTATGG ATTGTGCCGT GTGCCACGTT CAGGATGAGG CTTTAGCGGA TAAAGATCTG TGGTTAGCGA ATGCTAATGC CAACGCTTGT ACTGGTTGTC ACACTGACTC TCCGGCTCAA CATAAGTCAG ATAAGAACCC TGCACTTGTC TGTACTGATT GCCATAGCGC GGCGGTACAT ACAGACAGAG AGAAACCTTA TCAAGCTGCC AAAGACTACA GTGTAGAAGT GAGTGATGTC ACTATCAGTG CCGCTAATCT TATCGAATTT GAGATGAAGA TTATGGATGC TGAAGGAGCA CTGGTTTCTG AAGCTGAGGT TTACAAGCAG GGTTACAGCA AGCCATATAT GGTAGTGAGC TGGGATGTTG AGAAAGACTA CCCAGATTAC AATCAAGCCT CTTATAGCAG CCGTCGTGTT GACATAAAAG ATCCAACTAA GGCGACTTGG AATGCTGATA ATACGGTTAG TGTTGCAGTG ACGATTAACT TCCCAGTTGA TATTGCCGCA CGTTCACTTG AAGTGTTGCC AGTACTTAAG GTCTGTTTTG AAGAGGGTAG TGATAAGCGC ACGGCATGTG ATGCTGAAAA TGCCTATCCA GCCTATGTGC AAACCCCGGC TTACCGTACT GTGCTAGGTG ATAGTACCGC TGTTGTTGGT GAGCGTCGCT CGATTGTTGA TAATGCATCT TGTCATGGCT GTCACAGCTA TGAGTTCTAC CATGACTCAA ATGGTGTGAA CTGTATTGCG TGTCATACCA ATGATAAGAG CTTGAAAGGC AACGGCCAGG CTAGTAATGG TGTTGATCTG CTTAAATCTA CCAGCTTTAT GTACAAAGCT CATAAGGCAA CTGGCCATGA TAATGGCCAC GGTGGAAGCG GCACTATACT TAAGACAGAT TGTACAACTT GTCACTCTGC TACAGAGGGT TATGGTGGTC TGAAGTATGG CTTCGAGTTA GGCCGTAATG GTGGACAAGC TCATGCAGTC CCAAGTACTC AGAGTCCTGC TGTCGGTGAA GTGGTTGAAA CTTGGTACGC CTCCTCTGAT GCTGCTGCTT GTATGAGCTG TCACCAGAAG TACCTATCTG ATGCCGCAAT GTCTCATATC AGAAGTAATG GTGGTTACTT CGGCGCGAAT AAAGATGCGG ACCATATGGT TGATGTGAAT GATGCAGCTA ACGCAAAAGA TGCCAAGGAA GCATGTGCTA CTTGTCATAG CCCTGAGAAG ATTATGGCGC ACCACGGTCA TACTCTTTAG
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Protein sequence | MIKTNKKKIW LVLAAAMTMG VVGCSGDDGK DGSDGENGGN GNDGDAGTSG LHIDMANEAI ATITNATYAE GIITVDFDLE NKQGVGLFGL SGTNEYHDFR FSLAQLETDT GSELKQWISL LNETTNDTGT TFEQGFEKIK DCSECLVDNK DGTYTYNFKT NLVSATDAAG VVFDPALTQR IAIEMQFEYA SGHELAENAH YDWIPATNSI EGIEKRELVT LETCYTCHQP DSLEAHGGRR LDLENCQSCH NGIVTDPNAV SVELGHMVHA IHMGPEREGK DAEGNVVKMP YTIAGYGGDH AFDYPAFPTK PFMDCAVCHV QDEALADKDL WLANANANAC TGCHTDSPAQ HKSDKNPALV CTDCHSAAVH TDREKPYQAA KDYSVEVSDV TISAANLIEF EMKIMDAEGA LVSEAEVYKQ GYSKPYMVVS WDVEKDYPDY NQASYSSRRV DIKDPTKATW NADNTVSVAV TINFPVDIAA RSLEVLPVLK VCFEEGSDKR TACDAENAYP AYVQTPAYRT VLGDSTAVVG ERRSIVDNAS CHGCHSYEFY HDSNGVNCIA CHTNDKSLKG NGQASNGVDL LKSTSFMYKA HKATGHDNGH GGSGTILKTD CTTCHSATEG YGGLKYGFEL GRNGGQAHAV PSTQSPAVGE VVETWYASSD AAACMSCHQK YLSDAAMSHI RSNGGYFGAN KDADHMVDVN DAANAKDAKE ACATCHSPEK IMAHHGHTL
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