Gene Swoo_4243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4243 
Symbol 
ID6118598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5143703 
End bp5144545 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content44% 
IMG OID641635809 
Producthypothetical protein 
Protein accessionYP_001762594 
Protein GI170728568 
COG category[R] General function prediction only 
COG ID[COG1660] Predicted P-loop-containing kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.220847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000309991 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACTGG TTATGGTATC CGGTCGTTCC GGATCAGGAA AATCTGTCGC CCTCAGGGTT 
TTAGAGGATC TCGGATACTA TTGTGTCGAC AATCTTCCTC TGCCTCTTAT GGATACGCTA
TTGGAACAAC TCAAAGATAG CACAGAGCTT GTTGCTATCA GTGTTGATGT CCGTAATATG
CATGAGACAG AACTAGATAA ACAGCTTTCA AACCTACCTG AAGGGACTGA GCTACTAAGC
TTTTTCCTAA ATTCAAGCGA CGAAGTTCTC CTCAAGCGTT ACAGCGAAAC CCGTCGTCTC
CACCCTCTTT CGAGAAGTAA AACTTCACTT AAAGAAGCGA TAGATCATGA GCGGATACTG
CTAGAGCCAG TCTCTAAACT CGTTGATCAC TATATCGACA CCTCTAATCT CAATATTTAC
GATCTTAGTA ATCAGGTCAG AGAGATATTA TTAGGTAGTG TAGATAAAGA GCTAGTCATT
AACTTCGAAT CTTTCGGTTT CAAACATGGC ATGCCAGCAG AGGCAGATTT TATGTTTGAT
GTTAGGTTCT TACCAAATCC TCATTGGGAG CCAGAGCTTA GGCCGATGAC AGGCTTGGAT
GAACCCGTTC AGCTTTTCCT TAGTCAGCAA CCCACTGTCA ATAAGTTTAT CTGGCAAATA
GAGAACTTGT TAGAGACCTG GCTACCGCAC CTTGAGCGCA ATAACCGTAG CTATCTAACA
ATCGCTATAG GTTGCACTGG TGGGCAACAC AGATCTGTCT ATGTCACAGA GCAGCTTGCT
AAGCTGTTTA GTCAAAGCAA ACACACAGTA CAGGCTCGCC ATCGCGAATT AAGCAATGAC
TAA
 
Protein sequence
MKLVMVSGRS GSGKSVALRV LEDLGYYCVD NLPLPLMDTL LEQLKDSTEL VAISVDVRNM 
HETELDKQLS NLPEGTELLS FFLNSSDEVL LKRYSETRRL HPLSRSKTSL KEAIDHERIL
LEPVSKLVDH YIDTSNLNIY DLSNQVREIL LGSVDKELVI NFESFGFKHG MPAEADFMFD
VRFLPNPHWE PELRPMTGLD EPVQLFLSQQ PTVNKFIWQI ENLLETWLPH LERNNRSYLT
IAIGCTGGQH RSVYVTEQLA KLFSQSKHTV QARHRELSND