Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4243 |
Symbol | |
ID | 6118598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5143703 |
End bp | 5144545 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641635809 |
Product | hypothetical protein |
Protein accession | YP_001762594 |
Protein GI | 170728568 |
COG category | [R] General function prediction only |
COG ID | [COG1660] Predicted P-loop-containing kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.220847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000309991 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACTGG TTATGGTATC CGGTCGTTCC GGATCAGGAA AATCTGTCGC CCTCAGGGTT TTAGAGGATC TCGGATACTA TTGTGTCGAC AATCTTCCTC TGCCTCTTAT GGATACGCTA TTGGAACAAC TCAAAGATAG CACAGAGCTT GTTGCTATCA GTGTTGATGT CCGTAATATG CATGAGACAG AACTAGATAA ACAGCTTTCA AACCTACCTG AAGGGACTGA GCTACTAAGC TTTTTCCTAA ATTCAAGCGA CGAAGTTCTC CTCAAGCGTT ACAGCGAAAC CCGTCGTCTC CACCCTCTTT CGAGAAGTAA AACTTCACTT AAAGAAGCGA TAGATCATGA GCGGATACTG CTAGAGCCAG TCTCTAAACT CGTTGATCAC TATATCGACA CCTCTAATCT CAATATTTAC GATCTTAGTA ATCAGGTCAG AGAGATATTA TTAGGTAGTG TAGATAAAGA GCTAGTCATT AACTTCGAAT CTTTCGGTTT CAAACATGGC ATGCCAGCAG AGGCAGATTT TATGTTTGAT GTTAGGTTCT TACCAAATCC TCATTGGGAG CCAGAGCTTA GGCCGATGAC AGGCTTGGAT GAACCCGTTC AGCTTTTCCT TAGTCAGCAA CCCACTGTCA ATAAGTTTAT CTGGCAAATA GAGAACTTGT TAGAGACCTG GCTACCGCAC CTTGAGCGCA ATAACCGTAG CTATCTAACA ATCGCTATAG GTTGCACTGG TGGGCAACAC AGATCTGTCT ATGTCACAGA GCAGCTTGCT AAGCTGTTTA GTCAAAGCAA ACACACAGTA CAGGCTCGCC ATCGCGAATT AAGCAATGAC TAA
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Protein sequence | MKLVMVSGRS GSGKSVALRV LEDLGYYCVD NLPLPLMDTL LEQLKDSTEL VAISVDVRNM HETELDKQLS NLPEGTELLS FFLNSSDEVL LKRYSETRRL HPLSRSKTSL KEAIDHERIL LEPVSKLVDH YIDTSNLNIY DLSNQVREIL LGSVDKELVI NFESFGFKHG MPAEADFMFD VRFLPNPHWE PELRPMTGLD EPVQLFLSQQ PTVNKFIWQI ENLLETWLPH LERNNRSYLT IAIGCTGGQH RSVYVTEQLA KLFSQSKHTV QARHRELSND
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