| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4235 |
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| Symbol | |
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| ID | 6118590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5137550 |
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| End bp | 5138527 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635801 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_001762586 |
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| Protein GI | 170728560 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000366362 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTAGATG TAACTCAACT TCGCCAATGG GGCAGAACTG TTATCGACAT CGAGCGCAAC
GCACTCGATA ACCTTTACCA GTACGTCGAC TCGGAAGAGT TCACCCAAGC CTGTAAGCTA
ATTCTTAACT GTACAGGTAA AGTTATCGTA ATGGGCATGG GTAAATCAGG TCATATCGGT
AACAAGATCT CTGCAACATT AGCCAGCACT GGTACCCCAG CCTTCTTTGT TCACCCTGGA
GAGGCGAGCC ACGGAGATCT CGGCGTTCTC AGTGAAAATG ATATTATCTT AGCCATATCA
AACTCAGGTG AAGCCAGTGA GATACTCACC TTAATGCCTG TCATTAAACG CATGGGATTG
CCAGTTATCG CTTGTACGGG AAACCCTGAT TCAAATATGG CTAAACTCTC TGTTGTGCAT
CTGTGTATAG AGGTGCCAGA AGAGGCGTGT CCATTAGGGT TAGCACCAAC ATCGAGCACC
ACAGCAACCT TAGTCATGGG CGATGCCTTA GCCGTTGCGC TTTTGCAAGC TAGAGGCTTT
ACCAAAGATG ATTTTGCCCT CTCTCATCCC GGTGGTAGCT TAGGACGTAA GCTGCTACTT
AAGGTCAGTG ATGTGATGCA TAAAGGCAAA GATCTGCCCT CGGTAAACCA TGATATCTGC
ATCACTGAAG CCCTCTATGA GATCTCTAAA AAAAGCTTAG GTATGACAGC TGTCGTCGAT
GAGGCAAATA AACTGGTAGG TATCTTTACC GATGGCGACC TAAGACGCGT TATCGACAGT
GAAGTCAATC TTCGCACCAC CTCTATCAGT GATGTAATGT CTAAAGGGTG CGTCACTGTT
TCTGCCGACA TTTTAGCGGC TGCTGCACTG AAAGTGATGG AAGATAAAGA TATTAATGGT
TTGATCGTTA TCGATGATCA GCAGCATCCA ATAGGTGCCT TAAACATGTT AGATATGGTC
AAGGCTGGCG TTATCTAA
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| Protein sequence | MVDVTQLRQW GRTVIDIERN ALDNLYQYVD SEEFTQACKL ILNCTGKVIV MGMGKSGHIG
NKISATLAST GTPAFFVHPG EASHGDLGVL SENDIILAIS NSGEASEILT LMPVIKRMGL
PVIACTGNPD SNMAKLSVVH LCIEVPEEAC PLGLAPTSST TATLVMGDAL AVALLQARGF
TKDDFALSHP GGSLGRKLLL KVSDVMHKGK DLPSVNHDIC ITEALYEISK KSLGMTAVVD
EANKLVGIFT DGDLRRVIDS EVNLRTTSIS DVMSKGCVTV SADILAAAAL KVMEDKDING
LIVIDDQQHP IGALNMLDMV KAGVI
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