Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4222 |
Symbol | rplM |
ID | 6118577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5126496 |
End bp | 5126927 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641635788 |
Product | 50S ribosomal protein L13 |
Protein accession | YP_001762573 |
Protein GI | 170728547 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0102] Ribosomal protein L13 |
TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000936521 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00032903 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGACTA CTTTTACTGC TACACCAGAG ACAGTCACTC GCGAGTGGTT TGTCGTTGAC GCTGAAGGTA AAACTTTAGG TCGTATCGCT ACTGAAATTG CTACACGTCT ACGTGGTAAG CATAAGCCAG AGTATACACC TCATGTTGAT ACCGGCGATT ACATCATCGT TATTAACGCT GAGAAAGTTG CTGTCACTGG TAATAAAGCG AAAGGCAAAG TGTACTACTC GCATTCGGGT TTCATCGGTG GTATTAAGCA AATCACTTTT GAAAAGCTGC AAGATCATAA GCCTGAAATG ATTATCGAGA AAGCAGTTAA GGGTATGTTA CCTAAAGGTC CTTTAGGACG TGCCATGTTC CGTAAACTTA AAGTTTACGC TGGTACAGAA CATAACCACG CTGCACAACA ACCTCAAGTT CTTGATATCT AA
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Protein sequence | MKTTFTATPE TVTREWFVVD AEGKTLGRIA TEIATRLRGK HKPEYTPHVD TGDYIIVINA EKVAVTGNKA KGKVYYSHSG FIGGIKQITF EKLQDHKPEM IIEKAVKGML PKGPLGRAMF RKLKVYAGTE HNHAAQQPQV LDI
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