Gene Swoo_4174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4174 
Symbol 
ID6118525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5076842 
End bp5077300 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content41% 
IMG OID641635736 
Producthypothetical protein 
Protein accessionYP_001762525 
Protein GI170728499 
COG category[R] General function prediction only 
COG ID[COG0802] Predicted ATPase or kinase 
TIGRFAM ID[TIGR00150] ATPase, YjeE family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCAG TTAAAGTCTA CTTAGATAAT GAGCAAGATA TGGTCGAGTT AGGGAAGCGA 
TTAGCGGCAA TCATTACGCC TCCATTGATC TTAAACCTAT CGGGTGAGCT TGGTGCAGGT
AAAACGACCT TAAGTCGTGG ATTGATACAG GCTTTTGGCC ATCAAGGTGC GGTAAAGAGT
CCTACTTATG CTTTAGTAGA GCCCTATGAG CTAGCTGGCA TCGATCTATT TCATTTCGAT
CTTTATCGTT TAAGCGATCC TGAAGAGTTA GAGTTTATGG GGATCAGAGA TTATTTCACC
GAAAATAGTA TCTGTATCGT TGAGTGGCCT GATCGTGGTC ATGGGTTAAT GCCCGAAGCA
GATATAAGTT GTCACATAAA ATATCTGGAT GCAGGTCGTG AGGTTGAGAT AGTTTCAGGA
TCTGAAAAAG GGCAGTTGTT ACTAAGTAAA TTCAAATAA
 
Protein sequence
MTSVKVYLDN EQDMVELGKR LAAIITPPLI LNLSGELGAG KTTLSRGLIQ AFGHQGAVKS 
PTYALVEPYE LAGIDLFHFD LYRLSDPEEL EFMGIRDYFT ENSICIVEWP DRGHGLMPEA
DISCHIKYLD AGREVEIVSG SEKGQLLLSK FK