| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4168 |
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| Symbol | |
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| ID | 6118519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5069810 |
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| End bp | 5070949 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635730 |
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| Product | HflK protein |
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| Protein accession | YP_001762519 |
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| Protein GI | 170728493 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000320742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTGGA ATGAGCCCGG TAACAAGGGT AAAGACCCTT GGGGGAATAA GAATGGTAAC
GATAAGGGAC CACCAGATCT AGATGAGGTG TTTCGTAACA TCTCTAAACG CTTTGGCGGT
GGCAAAGGCA ATGGTTCTGG CTCGAGCTTT AGCTCATTTA GCCTAATCAT CGTTTTAGGC
ATTGCTATTG TTGTGTGGGG GCTATCAGGT TTCTATACAG TTAAAGAAGC TGAAAAAGGC
GTGGCGCTGA GATTTGGTCA GTATGTTGGT GAAGTAGAGC CAGGTTTACA ATGGAAGGCT
ACATTCATTG ATGAAGTATT CCCTGTTAAC GTGAATACAG TTCGTTCAAT TCCTGCGTCT
GGAAGTATGT TGACAGCCGA TGAAAACGTC GTCTTAGTTG AGCTTGACGT TCAGTATCGA
GTGGTTGATG CATACCGTTT CCTATTCAGC GCCGTTGATG CTAATGCCAG TTTACGTGAA
GCAACGGATA GTGCCTTGCG CTATGTTGTT GGTCACAACA AGATGGATGA CATCTTAACT
ACTGGTCGTG ATCAGATCCG TCGTGATACT TGGGCTGAAG TTGAGCGTAT TATTGAGCCT
TATAAGCTTG GTATAGCGAT TGAAGATGTT AACTTCCTAC CGGCTCGTCC GCCGGAAGAG
GTTAAAGATG CTTTCGATGA CGCTATCTCT GCTCAAGAAG ATGAACAGCG CTTTATTCGT
GAAGCGGAAG CATACGCCAG AGCCATTGAA CCAAAAGCTC GTGGTCAAGT TCAGCGTATG
GAGCAACAAG CTAACGCTTA TAAAGAGCGT GAAATCCTAG AGGCTAGAGG TAAGGTTGCT
CGCTTTGAGC TTTTACTTCC TCAATATAAG GCTGCACCAG AAGTGACACG TGAGCGTTTG
TATCTAGATG CAATGCAAAC GGTTATGTCT GGAACAAGTA AAGTGCTTGT AGACTCTAAG
AGTAGTAATA ACATGATGTA TTTACCTCTG GATAAACTGA TGCAAAAGAA TCAGTCTGGT
GCTAAGCCTC AAAAAGTGAA TTCAGCTGCT TCGCTTAATT CATCGAGCAG TACTATGGGC
CAGAACAGCA TGCCAATTGA CTCACGCCCA TCACGCGGCG AACGTCAGGG GAGAAACTAA
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| Protein sequence | MAWNEPGNKG KDPWGNKNGN DKGPPDLDEV FRNISKRFGG GKGNGSGSSF SSFSLIIVLG
IAIVVWGLSG FYTVKEAEKG VALRFGQYVG EVEPGLQWKA TFIDEVFPVN VNTVRSIPAS
GSMLTADENV VLVELDVQYR VVDAYRFLFS AVDANASLRE ATDSALRYVV GHNKMDDILT
TGRDQIRRDT WAEVERIIEP YKLGIAIEDV NFLPARPPEE VKDAFDDAIS AQEDEQRFIR
EAEAYARAIE PKARGQVQRM EQQANAYKER EILEARGKVA RFELLLPQYK AAPEVTRERL
YLDAMQTVMS GTSKVLVDSK SSNNMMYLPL DKLMQKNQSG AKPQKVNSAA SLNSSSSTMG
QNSMPIDSRP SRGERQGRN
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