| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4161 |
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| Symbol | |
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| ID | 6118512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5063750 |
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| End bp | 5064850 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635723 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001762512 |
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| Protein GI | 170728486 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.61051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAACC TAGCCTCTCT TTTTCTTAAG CTATTGACCT TAGGCTGCCA ACATAGCAGT
AGTAAAACCT TAGAGCGTAA GGTAATACAG GTGAACCTTG GTGTGATGGT CAGCGCGACG
ACCATACTCA CCTTTGATTT TCTGTTTTAC CTTACAGGAA ATGGAGCACT CATCTACTCC
GGGCTGATAC AGACTCCATT CCTGCTTTTG CTACCAACAG TCTGGTGGCT TAATCATACT
GGCCGGCTAT TTTTGGCAAG ATGGGCTATC TTTATCATCG TCATATCTGA TACAACTTCC
ACCCTGCTTT TAGCACAAGG AACCCAGCTA CTAATCCATT ACTACTTCCT GCTATTTGCC
ATCATTCCTG CTGCATTCTT CGAGATATCT CAATGGCGCT CATCGGCAAT CTTATTTATA
ACCAACCTAA GCCTCTATTT TTTCTTCCAA CTAAACGGCT GGGAGGCACT TCCTGAAATA
TATGAACTAC AGGCGCAGCA ACTCAATCTT CTTAGAGTTA TCATGGTTGG ATCCAGTGTG
TTCACCATTA TCTTACTGCT ATTGATAAGT GAGCGTTACT CAGAAAGGAA TGAGATTTTT
CTAGAAAAAC TTGCCAATAC CGATCCCCTA ACCTCCCTCA ATAACCGTCG CCACTTTATC
GATAATGTTC AGCAACAACT GGCAAAAAAG TTAGATCAAA ACCTGGCTCT TGCCATCATA
GATATAGACC ACTTTAAACA AATTAATGAC ACTGGTGGTC ACGATGCAGG AGATGAAGCA
CTCAAGCATA TTAGCCAGAT ACTTAGTAAG CATGTTGGGG AAAAGGAGCT GCTGGCAAGG
ATTGGAGGTG AGGAGTTCGC GATCCTCTAC ATAGAGTCCA CTGCAGAGTT AGCGACGAAA
AAAGGCGATG CACTTCTTAG GCAGTTTGAA AACACTCCTT TTTACTATTT CGAAAAGGAG
TACAAGATCA CCGCCTCAAT CGGTTTATGC TTATTTACAG GCCAGCAAGA TCTAGATCAA
GTGATGAGGG AGGCAGATGA GGCGCTTTAT CAGGCTAAAG AGGGGGGAAG AAACCGACAA
AAGATCAAAA AAATTGCATA A
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| Protein sequence | MPNLASLFLK LLTLGCQHSS SKTLERKVIQ VNLGVMVSAT TILTFDFLFY LTGNGALIYS
GLIQTPFLLL LPTVWWLNHT GRLFLARWAI FIIVISDTTS TLLLAQGTQL LIHYYFLLFA
IIPAAFFEIS QWRSSAILFI TNLSLYFFFQ LNGWEALPEI YELQAQQLNL LRVIMVGSSV
FTIILLLLIS ERYSERNEIF LEKLANTDPL TSLNNRRHFI DNVQQQLAKK LDQNLALAII
DIDHFKQIND TGGHDAGDEA LKHISQILSK HVGEKELLAR IGGEEFAILY IESTAELATK
KGDALLRQFE NTPFYYFEKE YKITASIGLC LFTGQQDLDQ VMREADEALY QAKEGGRNRQ
KIKKIA
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