Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4086 |
Symbol | |
ID | 6118436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4957666 |
End bp | 4958505 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641635647 |
Product | ABC transporter related |
Protein accession | YP_001762437 |
Protein GI | 170728411 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.778722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATAGAGC GAATTGTTCA AGAGACTGAA ATACTTAAGG TCGATAACTT AAGCTGGCAT GCCGATGAGC GTGAGATCTT ATCCGGTATC CACTTCTGCC TAACAAAAGG GGAGATGTTA GGGATCATTG GTCCCAATGG TGCCGGTAAA TCCAGCCTGC TGCGCTGTCT CTACCGATAT ATCAAACCAA GCTCAGGCGC AATTACCCTT TTTGGTGACG AGATAGCAAC GCTATCAGCA AAGGAGTTTG CTAAGCGAGT AGCGGTTGTA CTCCAGGACA CGCCACACCA TTTTGACCTG ACCACAGCGC AGCTGGTGGC TATTGGGTTA ACTCCCCATA AGGGGCCTTT TGAGATAACC ACAGCTAAAG ACAGAGAGGT TATCAATGAT GCGCTAGCAA AAGTGGGGTT GACCCATAAA GCTGGGCAAG CTTATGAGCA CCTTTCCGGT GGTGAAAAGC AGCGTGCCTT GATTGCCCGG GCGATAGTGC AACGACCTAA ACTGCTGATT TTAGATGAGC CTACCAATCA TCTAGATATT CGTTATCAGA TACAGATCTT AGAGCTGCTT CGAAGCCTTA ATATTTCAGT TATCACCTCT ATTCATGATC TAAATCTTGC CAGTGCCCTG TGTGATCAGT TGCTGTTATT AGATGGAGGA AAGTGTATCT CCCATGGCGC ACCTGTAGAG GTGTTAACTG AGCAGCGAAT TGGGGACGTG TTCGGTGTCT GCTGTAAAGT CGAGCCGCAT CCTCAACATG CCAATCCTCA GATCAGCTAT TTTTATGGCT ACTCCTCAAT TAAAGAGAAG CAAGGGAGGC AAGATGACAG TGGCAGTTAA
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Protein sequence | MIERIVQETE ILKVDNLSWH ADEREILSGI HFCLTKGEML GIIGPNGAGK SSLLRCLYRY IKPSSGAITL FGDEIATLSA KEFAKRVAVV LQDTPHHFDL TTAQLVAIGL TPHKGPFEIT TAKDREVIND ALAKVGLTHK AGQAYEHLSG GEKQRALIAR AIVQRPKLLI LDEPTNHLDI RYQIQILELL RSLNISVITS IHDLNLASAL CDQLLLLDGG KCISHGAPVE VLTEQRIGDV FGVCCKVEPH PQHANPQISY FYGYSSIKEK QGRQDDSGS
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