| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4084 |
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| Symbol | cobT |
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| ID | 6118434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4955400 |
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| End bp | 4956440 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641635645 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_001762435 |
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| Protein GI | 170728409 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.271639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAGGCA TTGGGTTCGA TATTGCGCCA ATTAGTCATG AGTTTGATGA TGAGATTCAG
AGTAGAATTG ATAATAAGAC CAAACCATTA GGGGCGCTTG GTGAACTTGA GTTTCTGGCT
AAACAGATAG CTCGCGTACT AGGTAAGGAT AAGCCAAAGA TATCGAATCC TAAGCTGCTG
GTATTTGCCG CCGACCATGG TATTGCTGCT GCCGGAGTAT CGATAGCGCC GAGTGAAGTG
ACTACCCAGA TGGTGATGAA CTTTATCAAT GGCGGCGCGG CTATCAATGT GTTCTGCCGT
CAGGTGGGCT TTGAACTTGA AGTGATTGAT TGCGGAATTT TACAACCCTT GGAGGGGGTT
GAAGGGATTA TCGACCAACG ATTGGGGGCG GGAACGGCGC CGATCCACCG CCAAGCTGCA
ATGACATTGG GTGCGGTAAA GCAAGGCATG GAGATGGCGC GAGCGCGTAT TGAGCATCAT
CATCAACTTG GGTGTAACTT AATCGCCCTA GGTGAGATGG GCATAGGAAA TACCACCTCT
GCCGCTGCGA TAATGGCATG CATAATGGAA ATGGATAGTA TCGATTGTGT CGGGCGCGGC
ACAGGGATCG ACGCGGCAAC CCTAAAGCGT AAACAGATGC TTGTGGAACA GGCTCTGCAT
GTTCATGAGT CAGAGCTTGC CGATCCCTTT AATATTTTGG CCTGCCTTGG TGGCTTTGAA
ATCGTGCAGA TGACAGGGGC CATGCTTGCG GCTGCCGAAA GAGGCATGCT AGTGGTGATT
GATGGGTTTA TTGCCACGGC TGCGGCCATG GTAGCGGTAA AGATAAACCC TAATGTGCGC
GGTTATATGA TCTTTGGTCA TCAATCCGAT GAACGCGGTC ACTGCCTGAT GATGGAGCAC
CTGCATGCAC GTCCGTTATT GAAACTGGAT ATGAGATTAG GTGAAGGTAC CGGAGCCGCA
CTAGCGCTAC CTATGATCCA AGCTGCTGCT GGTTTTTACA ATGAGATGGC CAGCTTCAGT
GATGCGGGTA TAGAGATATA A
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| Protein sequence | MLGIGFDIAP ISHEFDDEIQ SRIDNKTKPL GALGELEFLA KQIARVLGKD KPKISNPKLL
VFAADHGIAA AGVSIAPSEV TTQMVMNFIN GGAAINVFCR QVGFELEVID CGILQPLEGV
EGIIDQRLGA GTAPIHRQAA MTLGAVKQGM EMARARIEHH HQLGCNLIAL GEMGIGNTTS
AAAIMACIME MDSIDCVGRG TGIDAATLKR KQMLVEQALH VHESELADPF NILACLGGFE
IVQMTGAMLA AAERGMLVVI DGFIATAAAM VAVKINPNVR GYMIFGHQSD ERGHCLMMEH
LHARPLLKLD MRLGEGTGAA LALPMIQAAA GFYNEMASFS DAGIEI
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