| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4069 |
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| Symbol | |
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| ID | 6118419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4939849 |
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| End bp | 4941306 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635630 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001762420 |
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| Protein GI | 170728394 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACGA TTCTCATCGT CGATGACAAC CAAGCAGTGT GTAACGCATT GTCGCTTATG
TTAGAGCTGA ACGGCTTTAA TACCCTTACT TGTCTCTCTC CAGAGGTTGC CCTCGAACTC
ATTCGATTAC ATGATATCGC CTTAGTGGTT CAGGATATGA ACTTCACCCA AGACACCACC
TCTGGTGAAG AGGGAAAGGC CTTGTTTTAT GCGCTGAGAG AGCTGCAGCC CGAGCTACCT
ATCGTATTGC TAACGGCATG GACTCAACTT GAGATAGCTG TTGAGTTAGT AAAAGAGGGA
GCAGCAGATT ATATGGGCAA ACCTTGGGAT GACACCAAGT TAGTCACTAG TATCAATAAT
CTGATCTCAT TACATGCGTT ATCTAAAGCC AATACTCAAC TGACTCGAGT TGAAAACGAT
CGTATGTCAG CAATTAAAGG CGCAGATCTG TGTGGCATTG TCTTTGGCAG TGGCGCCATG
CAACGTAGCG TGGATTTGGC ACTACAGATC GCTCGCTCCG ATGTCTCTGT GCTGATCACT
GGCCCCAATG GTGCGGGTAA AGATAAGCTT GCCGATATCA TACACGCGAA CTCATCGCTC
AAAACCAAGC CTTTTATCAA GGTTAACGTT GGCGCTTTGC CGATTGATCT ATTAGAGGCT
GAGCTGTTTG GTGCAGAGGC TGGAGCATTT ACAGGTGCTA ACAAGACACG TATTGGTCGT
TTCGAGGCAG CCGATGGTGG GACTTTATTT CTGGATGAGA TAGGTAATTT GCCCTTGTCG
GGTCAGATCA AACTATTGCG GGTGTTGCAA ACTGGCGAGT TTGAGCGTCT TGGGAGTCAC
CAGACTAAGA AAGTGAATGT CAGGGTACTC AGTGCAACCA ATGCTGACCT TGCTGAAGAT
ATTAAACAGG GGTGTTTTCG TGAAGACCTC TTCTATCGAC TTAACGTGAT TGAGCTTGCC
TTAGCACCGC TCAATCAACG TCAAGATGAT ATATTGCCTC TGGTCGAACA CTTTATTGGC
AGAGAGTTTT CACTGAATAA ACAAGCGCAA GAATCATTAG TTGCACACCC TTGGCCTGGC
AATGTACGTG AGCTGGAAAA TGCCTGTAAG CGAGCTGTGA TCTTAGCAAG TAGCCCTAAA
TTAACGCCAT CGGATTTTGG CCTTGGTAGC ATTAGCCACC TGTCTGAAGA TGATTCCAGT
GTTCGCTCTG CTCAAGTACA AGCCCTTGTA CAGAGTCAAG TACAAGCTCA GTCTGATACT
GCTAGCTCAA TAAGTCCTGA GTCTACAGAG CAGCTTGATT CAAGAGGGGC AGAGACCGAT
AAAACTCAGC TTGAGAAAAG TGAGATAGAA GCTGCGCTTA TCCAACATGG TGGGGTTATC
GCCAGAGTGG CCAAATCATT AGGTTTGAGT CGCCAAGCGC TTTATCGCAG AATGGAAAAA
TTCGGCATAG ATAAATAA
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| Protein sequence | MDTILIVDDN QAVCNALSLM LELNGFNTLT CLSPEVALEL IRLHDIALVV QDMNFTQDTT
SGEEGKALFY ALRELQPELP IVLLTAWTQL EIAVELVKEG AADYMGKPWD DTKLVTSINN
LISLHALSKA NTQLTRVEND RMSAIKGADL CGIVFGSGAM QRSVDLALQI ARSDVSVLIT
GPNGAGKDKL ADIIHANSSL KTKPFIKVNV GALPIDLLEA ELFGAEAGAF TGANKTRIGR
FEAADGGTLF LDEIGNLPLS GQIKLLRVLQ TGEFERLGSH QTKKVNVRVL SATNADLAED
IKQGCFREDL FYRLNVIELA LAPLNQRQDD ILPLVEHFIG REFSLNKQAQ ESLVAHPWPG
NVRELENACK RAVILASSPK LTPSDFGLGS ISHLSEDDSS VRSAQVQALV QSQVQAQSDT
ASSISPESTE QLDSRGAETD KTQLEKSEIE AALIQHGGVI ARVAKSLGLS RQALYRRMEK
FGIDK
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