| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3991 |
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| Symbol | |
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| ID | 6118341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4857072 |
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| End bp | 4857686 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635553 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001762343 |
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| Protein GI | 170728317 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.1147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.39027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTTTA CTGCTTGGCT GGGATTACTG GCTATCTGTT GTTTAGGCGC TATGTCGCCG
GGACCAAGTT TGGCCATGGT TGTCAGGCAT ACCTTAGGTG GCGGTCGAGG CAAAGGGATC
ATTTGTGCCT GGGCGCACTC TATTGGAATA GGTATCTATG CGTTAGTGAC ACTATTAGGT
CTGGCGGTTG TACTTAAGCA AGCGCCCATG GTGTTTAATG GCATTGCCAT CATAGGTGCC
CTTTATCTTG CTTGGATGGG CGTTCAAGCC TTGAGATCTA AAGGTGGGAT GTCAGATAAG
TTAGCCGCTG GTGAAAATAC CAGTGCATTA GAAGCTGCCC GTGACGGTAT CGCTATTTCA
CTTTTTAACC CTAAAATCAT GCTGTTCTTT TTGGCGCTGT TTAGTCAATT TGTGATGGTT
GCTGATAACC TAGTTGGCCA GTCACTGATT GTATTAACTC CTCTCGTAGT AGACGGGCTT
TGGTATACCA TCATCGCCTT AGTATTGTCC CATAAGTCAG TATTGCCTAA GCTGAGGTCG
AAGGCGGCAT TGATCGATAA GTTATCTGGG GTTGTATTGA TCTTGCTTGC GGTGCGGGTA
TTGGTGACTA TCTAG
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| Protein sequence | MSFTAWLGLL AICCLGAMSP GPSLAMVVRH TLGGGRGKGI ICAWAHSIGI GIYALVTLLG
LAVVLKQAPM VFNGIAIIGA LYLAWMGVQA LRSKGGMSDK LAAGENTSAL EAARDGIAIS
LFNPKIMLFF LALFSQFVMV ADNLVGQSLI VLTPLVVDGL WYTIIALVLS HKSVLPKLRS
KAALIDKLSG VVLILLAVRV LVTI
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