Gene Swoo_3983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3983 
Symbol 
ID6118333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4851773 
End bp4852369 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content39% 
IMG OID641635545 
ProductYceI family protein 
Protein accessionYP_001762335 
Protein GI170728309 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.812523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA CTTTTGCCAC TTTACTTTTA TCTATCGCGT TACTTGGATC AACTCAAGCC 
TCTGCTCAAT GGACATTGGA TTCAAACTCA GCTGCGTTGA ACTTTTTATC GACTAAAGTG
TTGATCAATA AACAGAGTAT TACAGAAGTT TCAGGTTTTA ATACATTATC TGGCACCGTT
TCTGATGACG GAGAATTCAT GTTAATGGTT CAGCTTGAGA GTGTGAATAC TCAAGTACCA
ATTCGAGATC AACGCCTTCG TGATTGGGTT TTTCAGGTGG AGAAATACAG CAGAGTTGAG
ATTTCAGGTC AGATATCGAA ATTAGAGCTC AAGGATTTAG CTATAGGTAA ACCTAAGGGA
ATTACTCAGG CATTGATATT AAAAACACAC GGGAAAGTAC TAACATTAAA GGCAGAACTT
CAGCTAGTGA AGAGTGCCGA TGGCGCACTT CATGTTTCCA CGCTTACGCC TATTTTGCTT
GATATTAAGC AACTCGATAT GAACCTTGGA GTTGAGAAAC TCATTGAGGT GATGGGCTTA
GCATCCATTA ATCAACAGAT CCCAATTACG TTTTATGGCA CCTTTACTGA GCGTTAA
 
Protein sequence
MKTTFATLLL SIALLGSTQA SAQWTLDSNS AALNFLSTKV LINKQSITEV SGFNTLSGTV 
SDDGEFMLMV QLESVNTQVP IRDQRLRDWV FQVEKYSRVE ISGQISKLEL KDLAIGKPKG
ITQALILKTH GKVLTLKAEL QLVKSADGAL HVSTLTPILL DIKQLDMNLG VEKLIEVMGL
ASINQQIPIT FYGTFTER