Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3978 |
Symbol | |
ID | 6118328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4848304 |
End bp | 4849008 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641635540 |
Product | two component transcriptional regulator |
Protein accession | YP_001762330 |
Protein GI | 170728304 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.832558 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCAG AAAAGCATAT TTTGGTGGTC GAAGATGATA TATCGCTGGC TGAGTGGGTT AGCGATTACT TACTCGATCA TGGCTATCAA GTCACGGTTG CCAGTCAAGG AGACTTTGCC TTAGAGATGA TTGCTGAGGA GCAGCCCGAT CTTGTTTTGC TCGATGTTAT GTTACCGGTT AAAAATGGCT TTGATGTATG TAAAGAGGCT CGTGCATTCT ATGCTGGCCC CATTCTATTT ATGACCGCTT GTGTCGAGGA TGGAGATGAG ATCCAAGGCC TAGAAGTGGG GGCCGACGAT TATCTCACTA AACCTATTCG CCCAAAAGTT ATGTTAGCTC GTATTAAAGC GTTACTGCGC CGTGCCATTG ATGACAAACT TAAGCAGCAG CTGGTATTTG AATCTCTTAT CTTAAATGCA GCTGCTAAGT CTGTCATGGT TGATGATGAG TTGTTAGATC TTAATGCCAA TGAGTTTGAT GTATTTTGGT TGCTTGCACT GCAAGCGGGA AAAGTGGTTA GTCGTATCGA CTTAGTGTCT GAGCTTCGTG GTATAGAGTA TGATGGCCTT GACCGCTCGG TTGATATTCG AGTGTCACGA TTACGTAAAA AATTACAGGA AGCCAAAAGT CAGCCCTATA AAATCAAAAC CATTCGCGGA AAAGGTTATC TATTTTGTCG CGACGATGAT GAAGCAATGT TATGA
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Protein sequence | MSAEKHILVV EDDISLAEWV SDYLLDHGYQ VTVASQGDFA LEMIAEEQPD LVLLDVMLPV KNGFDVCKEA RAFYAGPILF MTACVEDGDE IQGLEVGADD YLTKPIRPKV MLARIKALLR RAIDDKLKQQ LVFESLILNA AAKSVMVDDE LLDLNANEFD VFWLLALQAG KVVSRIDLVS ELRGIEYDGL DRSVDIRVSR LRKKLQEAKS QPYKIKTIRG KGYLFCRDDD EAML
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