Gene Swoo_3974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3974 
Symbol 
ID6118323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4844576 
End bp4844884 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content45% 
IMG OID641635535 
Producthypothetical protein 
Protein accessionYP_001762326 
Protein GI170728300 
COG category[S] Function unknown 
COG ID[COG3027] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCC ACGCTATTGA AATTAGCTTA CTAGGCCGCA CATACTCCAT CGCTTGCCCT 
CCGGGACAAG AGACAGCATT GCAGCACGTG GCACAAAAAC TTGAGAAGCA GTTAACCTCG
CTAAAAGCGA GAACTAACAA CTTAAGTCGT GAAGAGATTG CCATTATGGC GGCGCTGAAC
ATAGGCTATG AGCTGCTAGA AGAGCAGCAA AAAAATCAAG ATTACAATAG ACAGATGGAT
GAGAAGATCG GTCTGCTACA ATCAACTTTA GAGGACGCCT TAGTTGAGCG TTCAACCAAA
GAAGATTAA
 
Protein sequence
MSSHAIEISL LGRTYSIACP PGQETALQHV AQKLEKQLTS LKARTNNLSR EEIAIMAALN 
IGYELLEEQQ KNQDYNRQMD EKIGLLQSTL EDALVERSTK ED