| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3970 |
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| Symbol | |
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| ID | 6118319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4840493 |
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| End bp | 4841707 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641635531 |
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| Product | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
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| Protein accession | YP_001762322 |
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| Protein GI | 170728296 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAGCA CTAAAACCTA TGACGTTGCT ATTGTTGGTG GAGGCATGGT TGGCCTAGCG
ACTGCAATAG GCTTGGCCAT GGAGAGTCTG CGTGTCGTGG TTATCGATGC GGGAGAAACT
CAGACCGTCA CAGGCTCACC TAAACTTAGG GTGAGTGCAA TCAACAAGGC GAGTCAGCGA
CTACTGCAAA ATATCGGTGC TTGGCCCTAT CTCGATGAAG GGCGCTTGAG CCCCTATCAG
AAGATGGCGG TGTGGGATAA GGACAGTTTG GGCAAGATAT CATTCGATGC CCATAGTCTC
AGTGAACAGT ATCTTGGGAG CATTATCGAA AATGATAATA TCGCCCATGC GCTGGTTAAG
CGTGCTGCAG AGTTCGATGA GATCACCCAT ATCGAAAACC ATAAGTTAGA AAAAATAGCC
TTTGGTGAGC GTGAAGCCTG GCTCACATTG GACAATGGTG ACAATGTCAG CGCTGCATTG
GTTATCGGCG CCGATGGTGC AAACTCTTGG GTGCGCGAGC AGTGCAAGAT CCCCATGACA
TTCTGGGATT ACGGCCACCA TGCTATCGTG GCTACAGTAC GCACCGAGAT CCCCCATCAA
GACACAGCTC GTCAGGTTTT TCTTAAGGAT GGCCCATTAG CTTTTCTGCC ACTTTATGAA
AATAACCTAT GCTCTATTGT CTGGTCAGTG CCGCCGGCTA AAGCTCAGCA GTTGCTAGAG
GGAGATAAAC AGGCCTTTGA GCGTACCCTA ACCGCTGAAT TCGATGGTCG TATGGGCATG
TGTCAGCTTG AATGTGATCC ACAAGCTTTC CCATTACGTA TGCGTTATGC GCGTCACTTT
GCTCGACATC GTTTGCTGTT AGCGGGCGAT GCTGCTCACA CTATCCACCC CTTGGCGGGG
CAGGGAGTGA ATCTGGGTTT CCTTGATGCG GCGGCAATAA TACAAACCTT AAGCGAGCTT
AAACTTGAGG GTAAAGATCT AGGAGACTAT AGCAACCTGC GGGCGCTTGA GCGTTGGCGT
AAGGCGGATG CGCTGGAGAT GATCGCCGGA ATGGAGGGCT TTAAGCGTCT GTTCGAAGGT
AGCCATCCAG TTAAGAAAGC GTTACGTGAT TTTGGCTTAA ATTTGGTCGA TAATTTTTCT
CCTGCGAAAA CACTGTTTAT GCAACAGGCC ATGGGCAACA AAACAGGCCT TCCGGACCTG
TGTAAAGCTC AATAA
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| Protein sequence | MLSTKTYDVA IVGGGMVGLA TAIGLAMESL RVVVIDAGET QTVTGSPKLR VSAINKASQR
LLQNIGAWPY LDEGRLSPYQ KMAVWDKDSL GKISFDAHSL SEQYLGSIIE NDNIAHALVK
RAAEFDEITH IENHKLEKIA FGEREAWLTL DNGDNVSAAL VIGADGANSW VREQCKIPMT
FWDYGHHAIV ATVRTEIPHQ DTARQVFLKD GPLAFLPLYE NNLCSIVWSV PPAKAQQLLE
GDKQAFERTL TAEFDGRMGM CQLECDPQAF PLRMRYARHF ARHRLLLAGD AAHTIHPLAG
QGVNLGFLDA AAIIQTLSEL KLEGKDLGDY SNLRALERWR KADALEMIAG MEGFKRLFEG
SHPVKKALRD FGLNLVDNFS PAKTLFMQQA MGNKTGLPDL CKAQ
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