Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3942 |
Symbol | |
ID | 6118291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4807695 |
End bp | 4810301 |
Gene Length | 2607 bp |
Protein Length | 868 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641635503 |
Product | UTP-GlnB uridylyltransferase, GlnD |
Protein accession | YP_001762294 |
Protein GI | 170728268 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGACT CAGATATATC GCCTCAATTC AGTTCCAAAA TGAGCATTAG TGATTATAAA AAAATAATTC AAGATGCTGA CAACTACTTT AATGATAACT TTACCTATAT TGCTATTGAT GAAATTGTAA AGTTACGTGC CGATTTCTTT GATACTCTGC TGCTTCACCT ATGGGAGTGC GCCGAGCTAA CCTCCGACAA TATCTCTCTC AACGCCGTTG GTGGCTATGG CCGTCAAACC CTACATCTTC ATTCTGATAT CGATATCTGT GTACTTTTCT CCCAAACGCT CACGCCCCAA GAGGAGTCTC AAATTGGTCT TTTCTTTACC CAGTTGTGGG ATCTTGGTTT AGAGCTTGGT CATAGTGTAT TGGGATTGAG TGAGGTAGAT AAAGCCTGTA AAGAGGATAT CTCTACCGCG ACCTCACTGT TCGAGATGCG TCACTTAACG GGTCCAAAAT CCCATGCTGA AGAGGTGTTA AGTCGACTAT ATGGCGATAA TCTCTGGAGC AGTGAAGCCT TTTTTAATGC AAAGGTGATT GAGCAAGATG AGCGCCACCA AAAAGCCCAA GGCAGTGCTT TTAGCCTAGA GCCAAACTTA AAAAATAGCC CAGGGGGAAT GCGCGATATT CAAACCCTTA TCTGGGTTAC CCGTAAGTAT TTTTCCGCTG AAGATATGGC GGCTTTAAGG CGCTTTGGTT TCTTTACCTC TGATGAGTAC TCGGAGTTGC TAGAATCACA GAACTTTATT TGGCGAACTC GTTGGGCACT GCATGCTGCA GCGCAGCGTT CTGAAAATCG TCTGCTTATT TCTTTGCAAA GTGATGTCGC GCGCCTTATG GGGTTTGGCG ACAACAGTCA CCTGGCTATC GAAAAGATGA TGCGTCAGCT ATACCGTGCT ATGAGGCGAA TTAGCGAACT TAACCAGATG CTACTGCTCT ATTTTAAGGA TGAGCTTTTA GCGCAAACTG ATAAAAAGAC GACCCTGTTA AATGAACATT TTGAGATAAA TAGCCGACTC ATTAATGCAC GCCATGATGA TGTTTTTGTT GACCGTACTC AGCTGATGGC ACTCTTTATT CATATTGCAG AAAATGCAGA TGATATTGAT GGTATTTCAC CACAAACGAT TCGTTTGATC CGTCAAGTAA GACGCCGTTT GCTTGGGGAT CTACAAGATT TTCATCGTTG TCGGAAGGAG TTTATCTCTC TATTTCGCCA TCCAGAAGGG ATGGGGCTGG CACTATCATT AATGCTTAAA CATGGTGTTC TAGCCTCATA TCTACCCCAA TGGCGTGAGA TCGTAGGGCA GATGCAGTTC GATCTTTATC ATGTTTACCC CGTTGACGAG CATACTCATA AATTACTTAA AAACCTCTAC TCCTTAAAAG ACAAGCCTGA GTCGGCCTCG CTTGTACAAC CTAGTGCGGT TTACAAAGCG ATTGAGAATA AAGAGGTGCT ACTGTTAGCT GCACTGTTCC ATGATCTCGC CAAAGGTCGT GGTGGCGATC ATAGTGAGTT GGGCGCGGTT GATGCGATGC AGTTTGCCAA GTTTCATGAA TTGAAACCAT CTCAAGCTAA AGTTATTGCC TGGTTAGTGC AGAATCATCT GCTGCTATCT CTCTCCTCAC AACGACTCGA TATTTATGAT CCTTCGGAAG TGAAGAACCT TGCTAAAACC ATAGGAACTA AAGCCAGACT CGATGCTCTC TACTGTTTAA CCGTTGCGGA TATTAAAGCA ACCAATGATG ATCTGTGGAC AAATTGGAAG GCCACGTTAC TTCGTGATCT ATATATGTCG ATAAGCTTTG CCCTACGTAA TGGCTTAGAA AACGTGTTAG AGCAGCGAAC AATTGTCCGT GAACATAAGA ATGAAGCCCT AGAGTTGATG GGGATGAGTG AAATTTCCGA AGAGATTAAA CTGCTCTGGA AACGCCTGCC TTTATCATTT TTTAGTAATG CTCAACCCAG CGATATTGCT CGTTACTCCC AAGCTATGAT CCAGTACCCA GCAGAGCATG CACTTATTTT ATTGGATGAG GGCAGCACTA AGGGCTGTAG TGATCTATTT GTCTATATGA AGGATAAACC GGGTCTGTTT GTTACCCTGT TTAACACTTT AGCATCGCTG CAGATCTCTG TGCAGCAAGC TAATATCTCT AAGACAAAAG ATGGTTACGT GGTGGAGTCG TTAAAAATAC TCGATTATGA CCAGCACCCT ATACGTACTG CTGGTCGACG TGAAAGTATT AAGCTGAAGC TGGAGCAGGT GTTATTTCAG AATAAGAAGG TCTCTAAACA GCGCCTTAAC AGTAACTTGG ACTCATTTGT CAGTGAGCCT AAAGTGGAGT TTTTGCATTC GCGCAAAAAA GACAGAACCT TGATTAGTGT GACGGCTCTG GATAATCCAC AATTTATGAG CCACTTCTGT AATGGATTCA GGCAGTTTGA GCTCAATATC CACTCGGCCA AAATCACTAC AGTGGGTGAG CAGGTCGATA ATGTCTTTCT TGTTTCAGAT AAAGATGGCC AGTCTCTCGA CGATGAGAGT AAGCAAACCT TAAAGTCCTT CTTTGTTGAT TTCATTAAGG AGCAGCCCAC AGCCTGA
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Protein sequence | MSDSDISPQF SSKMSISDYK KIIQDADNYF NDNFTYIAID EIVKLRADFF DTLLLHLWEC AELTSDNISL NAVGGYGRQT LHLHSDIDIC VLFSQTLTPQ EESQIGLFFT QLWDLGLELG HSVLGLSEVD KACKEDISTA TSLFEMRHLT GPKSHAEEVL SRLYGDNLWS SEAFFNAKVI EQDERHQKAQ GSAFSLEPNL KNSPGGMRDI QTLIWVTRKY FSAEDMAALR RFGFFTSDEY SELLESQNFI WRTRWALHAA AQRSENRLLI SLQSDVARLM GFGDNSHLAI EKMMRQLYRA MRRISELNQM LLLYFKDELL AQTDKKTTLL NEHFEINSRL INARHDDVFV DRTQLMALFI HIAENADDID GISPQTIRLI RQVRRRLLGD LQDFHRCRKE FISLFRHPEG MGLALSLMLK HGVLASYLPQ WREIVGQMQF DLYHVYPVDE HTHKLLKNLY SLKDKPESAS LVQPSAVYKA IENKEVLLLA ALFHDLAKGR GGDHSELGAV DAMQFAKFHE LKPSQAKVIA WLVQNHLLLS LSSQRLDIYD PSEVKNLAKT IGTKARLDAL YCLTVADIKA TNDDLWTNWK ATLLRDLYMS ISFALRNGLE NVLEQRTIVR EHKNEALELM GMSEISEEIK LLWKRLPLSF FSNAQPSDIA RYSQAMIQYP AEHALILLDE GSTKGCSDLF VYMKDKPGLF VTLFNTLASL QISVQQANIS KTKDGYVVES LKILDYDQHP IRTAGRRESI KLKLEQVLFQ NKKVSKQRLN SNLDSFVSEP KVEFLHSRKK DRTLISVTAL DNPQFMSHFC NGFRQFELNI HSAKITTVGE QVDNVFLVSD KDGQSLDDES KQTLKSFFVD FIKEQPTA
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