| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3915 |
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| Symbol | |
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| ID | 6118264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4773091 |
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| End bp | 4775232 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635477 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_001762268 |
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| Protein GI | 170728242 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATATT CATATCGCAG CTTATATGGA GTGATAGCCT TATTGTTATT TTCCTCTCAA
TCTCTAGCAG AGGACAATGA GGTTAAGGTA CTAGATGTTC GCTTTCTAGT TGCCGCAGCA
GATAAACAGG GAACAGACGC GCAGGCCGAT GGGGAGACAC TAAGAGAGGG GATCGAAAAG
TTAAACTTGT ACTACCAACC AATGGGCGTG CAGTTTAATC ATAAAGATAC GGTTTATATT
ACCAACGAAG ATGTGCCGGG TTTCCATGAT CCAGAAGATG GGTGGGACAC AGATGATGAG
GAGCTAGTCA GACCCTTCTT TGACCTCAAT AGCTACAACA TACTCGTGAC CGAGCTCAAA
CGTCTTAATG GTCACGCCTG GTGGCCCTAT GAAGCAACGG ATGCTGTAGA GGTCGATCCA
GAAGATCTTA TCTACTCCAC TACGGCCCAT GAGATAGGCC ATAACCTCAG CATCAGACAC
ACATACTCAA GTAACAGTGA TGGCCCAATC TCACTGCTAG CAGGCCCCAT GGGCTGGAAA
TATGGCGACC ATATTATCGA TACACCACCG GATCCCGATG AAGATGATTA CATAGAGAAC
TGTGTATACA ACGGTGACCT TGTTGATGAT GAGGGAGTGC TTTATGCTCC AGATGCTAAA
AACATCATGA GCGGAGGGAG AAACCGCTGC CGTACACACT TCTCCCCGCA GCAGCAGACT
CGTATGCTTA GTCTTATCTC TACCGACAAG TACCACCTTT ATGACAAATA TGGCGAAGGT
CGAACCGTGC CAACCTGTGA TAACTCAACC CAAGTGATTG AGTACCCTCA CCATGAAGGC
TTTAACGTTA ACGAGGTGGT AGCTGCAACC CCTTGGGTTC AGGATGTCGC CAATAATAGA
TATAACTGGC GCTTTGACAG TGACACCTCT TCATCTCGCA CTGGCGCCGA TGAGCCCGTA
GAGGGACACA GCTTTATCCA TGTCGACACA AGTAGGATGG ATGATTTTAT TAGCGAGGGC
GATCATGTTG CCATGCTCAG CCCCTGCTTT GATTTCACCA CTAAGAACTC ACCAACAATG
GCGTTTTACT TCTCTATGTA CGGTGAGGAT ATGGGCACCC TCTCCATTGA AGCCACATTA
GATAATGGCC AGAGCTGGCT TCCTGTTTGG CAGATGATAG GTCAAAAGCA CACAGATGGA
GAGTGGGAGC AGGTTAATGT GGATCTCGAT GAGTACGCTG GAAAGAAGGT TCAGTTTAGA
CTCGATTACC AAGTTCAGGG AGAAAAAGGT GATGCCTCTT TCGATAGCAT ACAGCTAGAT
GCCATATCTC AGGACAAGGT ACATGCAGTA TTAAGCAGCG ATAGCGTTGC CGAAGATGGC
ATGAGTTTCA CCTTTACCCT ACAAAGAGAG GGCAGCGTTG CTGGTGAAAC CTCGATTCAA
GTCGCTACCC AAGATCTGAC AGCCATGGCT GGCATCCATT ATGAGGCCAT CGACACTCAT
GTTGTTTTTG CTGCTGACGA AACCACTAAA ACACTAACCA TTAATATCTT AGATAACGAT
AATCTGGAAG GTGATACTCA GTTCAACATT ATTCTCTCGG GCGCTAATGC CCCTGTCGAT
AATCCACCTC TACTGATCAC TATCATCGAA GATGAAGAGG AGAATATCGC CCCTGTCGCT
AGCTTTGACT TTAATGTCAA AAACAGTAAG GTCAGCTTTA CTAGCACCGC TAGTGATGAG
GATGGCGAGA TAGTCAGTTA TCTGTGGGAC CTTGGTGATG GAAGCAGTGC AGATACCGAA
ACCTTGACCC ATCGCTATGC TCAAAGCGGC GATTATCTGG TGAGCCTCAC CGTGACCGAC
GATGACGGCC TGTCTCACAC CAGCTCTCAA ACAGTCTCAG TATCTAAAAA GAGTAAACCT
ACCGCTGTGA TTAAGCATAT AAACCTATGG TTTATCGATG TTTTTGTATC GCTTAGCTAT
GATGACGATG GCTATATCAC CCAGCACAGA TGGAAATTTA ATGATGGCAG CAAAGCCTCT
GGCCCAGTTG CAGTTAAATT TGGTAATCGC GCCTCTAAGG TAAAACTTAT CGTCAAAGAC
AATGACAACC TTAAAGGCAG AGCAAAACTC AAATTTAGAT AA
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| Protein sequence | MKYSYRSLYG VIALLLFSSQ SLAEDNEVKV LDVRFLVAAA DKQGTDAQAD GETLREGIEK
LNLYYQPMGV QFNHKDTVYI TNEDVPGFHD PEDGWDTDDE ELVRPFFDLN SYNILVTELK
RLNGHAWWPY EATDAVEVDP EDLIYSTTAH EIGHNLSIRH TYSSNSDGPI SLLAGPMGWK
YGDHIIDTPP DPDEDDYIEN CVYNGDLVDD EGVLYAPDAK NIMSGGRNRC RTHFSPQQQT
RMLSLISTDK YHLYDKYGEG RTVPTCDNST QVIEYPHHEG FNVNEVVAAT PWVQDVANNR
YNWRFDSDTS SSRTGADEPV EGHSFIHVDT SRMDDFISEG DHVAMLSPCF DFTTKNSPTM
AFYFSMYGED MGTLSIEATL DNGQSWLPVW QMIGQKHTDG EWEQVNVDLD EYAGKKVQFR
LDYQVQGEKG DASFDSIQLD AISQDKVHAV LSSDSVAEDG MSFTFTLQRE GSVAGETSIQ
VATQDLTAMA GIHYEAIDTH VVFAADETTK TLTINILDND NLEGDTQFNI ILSGANAPVD
NPPLLITIIE DEEENIAPVA SFDFNVKNSK VSFTSTASDE DGEIVSYLWD LGDGSSADTE
TLTHRYAQSG DYLVSLTVTD DDGLSHTSSQ TVSVSKKSKP TAVIKHINLW FIDVFVSLSY
DDDGYITQHR WKFNDGSKAS GPVAVKFGNR ASKVKLIVKD NDNLKGRAKL KFR
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