Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3885 |
Symbol | |
ID | 6118234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4734168 |
End bp | 4735394 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641635447 |
Product | Na+ dependent nucleoside transporter |
Protein accession | YP_001762238 |
Protein GI | 170728212 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000412566 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAGTTT TCATCAGTTT GTTGGGAATG TTCAGCCTGA TCGGTTTGGC TGTGCTGATT TCAGAGAAGC GAACCGCCAT TAATCTGCGC ACGGTACTGG GGGCTTTAGC GTTCCAGATC GCTTTCGGTG CATTTGTGAT GTATGTGCCT ATGGGGCAAT CCATGTTGGA CAGCGCCTCT GGCGGTGTGA TGCATGTAAT AGGTTACGCT AACGAAGGTT TATCATTCCT GTTTGGCGAT CTGGCTAAAT TTGGTGTTGG CTTCATCTTT GTGATTAACG TGCTATTTGT GGTGGTGTTT GTCAGCGCCC TGATTGCCGT GCTGTATTAC TTAGGGATCA TGCAGTTAAT TATAGGCTTG ATTGGTGGTG GCCTATCAAA GCTGCTTGGT ACCAGCCGCG CCGAGTCACT GTCTGCGACT GCCAACATCT TTGTTGGTCC TATTGAAGCG CCCTCGATGG TGCGTCCATT CGTTAAGCAC ATGACCCGCT CTGAACTATT TGCTGTGATG ACAGGTGGTT TAGCGTCTGT TGCTGGCGGC ACCATGATTG GCTATATCCA GATGGGCGTC GACGTTAAAT ATGTACTAAC TGCTGCCTTT ATGACTGCAC CTGCGGGTTT ACTGTTTGCC AAGCTTATCT GGCCTGAGAC TGAGGAGCCA CAAAACGATA TCAAGAAGGT GATGGATGAG CAGGATGACA GACCTGCTAA TGTCCTTGAC GCTGCAGCGG GTGGGGCGGC GATGGGGATG CAACAGGTTA TCTCGGTGTC GGCGCTACTG TTAGCTTTCG TTGCCTTGAT CGCTATGGTT AACGGCATTA TTGGTGGGAT CGGTGGCTGG TTTGGTTATG GCGAACTAAC TATGCAGATG ATCTTAGGTT ACCTGCTTGC ACCGTTGGCT TGGATCATGG GGGTGCCTTG GAGTGAAGCG ATTCAAGCGG CTTCCTTTAT TGGCCAGAAA ATGGTGATTA ATGAGTTTGT TGCCTATATC GACTTCCTTA AGGTTGCCGA TCAACTCTCA GAAAAGACGC AGATTATTAT CAGTTTTACC CTGTGTGGCT TTGCCAATAT AGGCTCTTTG GCCATGGTGA TTGGTGGCTT AGCGGCGCTT TGCCCTGAGC GCCGTCATGA TTTGAGTGCC ATCGGTATGA AGGCGCTTAT CGCTGCGGCG TTAGCGAACT TAATGAGCGG TACTATCGCA GGCTTACTCT TTAGCCTAGC GGGTTAA
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Protein sequence | MEVFISLLGM FSLIGLAVLI SEKRTAINLR TVLGALAFQI AFGAFVMYVP MGQSMLDSAS GGVMHVIGYA NEGLSFLFGD LAKFGVGFIF VINVLFVVVF VSALIAVLYY LGIMQLIIGL IGGGLSKLLG TSRAESLSAT ANIFVGPIEA PSMVRPFVKH MTRSELFAVM TGGLASVAGG TMIGYIQMGV DVKYVLTAAF MTAPAGLLFA KLIWPETEEP QNDIKKVMDE QDDRPANVLD AAAGGAAMGM QQVISVSALL LAFVALIAMV NGIIGGIGGW FGYGELTMQM ILGYLLAPLA WIMGVPWSEA IQAASFIGQK MVINEFVAYI DFLKVADQLS EKTQIIISFT LCGFANIGSL AMVIGGLAAL CPERRHDLSA IGMKALIAAA LANLMSGTIA GLLFSLAG
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