| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3835 |
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| Symbol | |
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| ID | 6118184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4678090 |
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| End bp | 4678656 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635398 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001762189 |
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| Protein GI | 170728163 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAAAG AGACCTTGAT ATACAAGACC TACCTAGCCT CAAGAGAGGG AATTGCTCGG
GTGGTTTCCC GCATTGTTCC TCCCCATGAG ATTGAGGATA TTGTGCAGGA GACCTATGTA
CGTTTATGTC AGGTAGAGAA TAAAGAAAGC ATTAATTCTG CCAAGTCATT TATGTATAAG
ATGGCGAGAA ACTTGGCTCT TGATCATCAA AAGCGGGCAA ATGTGAGATT AGTGGACAGC
GTTGATGATT GGCATGAGTT TGAGAAGGCG CTGTGTGACC GACATGATGA AGTGTATGAC
AAGGCAATTA CCAGCCTTGA GTTCGATAAC TTCTGTGAAG CGGTGCGATT GTTACCGCTG
CAGTGTCGTA AAGTATTTGT GCTAAAAAAG GTGTATGGCT ACTCTCAGCG AGAGATTGCC
GAGGAGCTCG AATTGAGTGA GAGTACAGTT GAGAAGCATA TCTCTCAGGG GATTAAACGG
TGTACAGTTT TTATGCGACA AGCACAAAAG GGCAAGACTC AGGTGAGTGC GACAACATCA
GGCAAACGTG GAGGTGCTCA TGAGTAA
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| Protein sequence | MLKETLIYKT YLASREGIAR VVSRIVPPHE IEDIVQETYV RLCQVENKES INSAKSFMYK
MARNLALDHQ KRANVRLVDS VDDWHEFEKA LCDRHDEVYD KAITSLEFDN FCEAVRLLPL
QCRKVFVLKK VYGYSQREIA EELELSESTV EKHISQGIKR CTVFMRQAQK GKTQVSATTS
GKRGGAHE
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