| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3800 |
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| Symbol | |
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| ID | 6118149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4639780 |
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| End bp | 4641045 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641635363 |
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| Product | poly(A) polymerase |
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| Protein accession | YP_001762154 |
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| Protein GI | 170728128 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000630801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000152208 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAAA ATGCCATAAA GGTACTCTAC CGACTGCATA AGTCAGGCTT TAAAGCTTAT
CTTGTGGGTG GCGGTGTGCG CGACATCTTA CTTGGCTTGC AACCTAAAGA TTTCGATGTA
GTCACCAATG CCACACCTGA AGAGATTAAG CGTCTGTTCC GTAACTGTCG CTTAGTCGGT
AGACGCTTTC GATTAGCTCA TATTGTCTTT GGCCGTGATG TCATCGAAGT TGCCACTCTA
CGTGGACACC ATGTCGATAA CGAAGAGAAG ATATCAAAGA CCAATGCCGA AGGCAGACTG
TTACGTGATA ACGTCTACGG CACCATAGAT GAAGATGCAG AGCGCCGTGA CTTTACCGTT
AACGCCCTCT ATTACGACAT CAGTGATTTC TCTATCCACA GCTATGGCGG TGGTTTAGAG
GATCTGCACT CTCGAACTAT CAGAATGATT GGCGATCCTA ATACTCGCTA CCGTGAAGAT
CCTGTTCGTA TGTTAAGGGC TGTTCGCTTT GCAACTAAGC TTGGAATGAC AGTGGATGAA
GAGACGGCAG CACCTATCTA TGAGTTAGCT CCCCTGCTAA AAGATATTCC TGCAGCTCGT
ATGTATGAAG AGGTACTTAA GCTTTTCTTC AACGGACAGG CGGAAAACAA CTTTGCCATG
ATGCGTGACT TTGGCTTGTT TGCACCACTT TTCCCACTTG TAGAGACTTT ACTCACCGAA
GACGCTAAAG GACCTGCAAC TAAGATGCTG CAGGTGATCA TGAAGAACAC CGATGCGCGG
GTTCAAGCTG AAAAGACAGT CACGCCGGCC TTCTTCTATG CCGCTATCCT TTGGTACCCT
CTGGCTCAAA AAGCCGATGA TATCGCGCTG GAAAGTGGTT TAAGCCTCTA CGATGCTTAC
TATGCTGCCA TGGGTGATAT TATGGAGCAG CAGTGCCGTA CTATCAGTAT TCCACGCCGC
TTCAGTACAC CAGCAAAAGA TATCTGGCAA TTGCAACTAC GCTTCGATCG TAATCAAGGC
ACTCGCGCCT TTAAATTTAT CGAGCATCCT AAGTTCCGTG CCGCCTATGA TCTACTTCTA
CTTCGCGCTG ACGCAGAGGG AGGCTCAGTG GCTAAATCTG CCGCTTGGTG GAAGAGCTTT
GTTGAAGCGG GTGAAGAGCA GCGTAGTGTG ATCGCTCGCT CAACCAATAA AGGTAGTCGT
AACAGAAACT CAAATCAGCG TAAACGGCGT AAGCCTGCAA ACAAAACGGC AAAACCTACA
GAGTAA
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| Protein sequence | MSENAIKVLY RLHKSGFKAY LVGGGVRDIL LGLQPKDFDV VTNATPEEIK RLFRNCRLVG
RRFRLAHIVF GRDVIEVATL RGHHVDNEEK ISKTNAEGRL LRDNVYGTID EDAERRDFTV
NALYYDISDF SIHSYGGGLE DLHSRTIRMI GDPNTRYRED PVRMLRAVRF ATKLGMTVDE
ETAAPIYELA PLLKDIPAAR MYEEVLKLFF NGQAENNFAM MRDFGLFAPL FPLVETLLTE
DAKGPATKML QVIMKNTDAR VQAEKTVTPA FFYAAILWYP LAQKADDIAL ESGLSLYDAY
YAAMGDIMEQ QCRTISIPRR FSTPAKDIWQ LQLRFDRNQG TRAFKFIEHP KFRAAYDLLL
LRADAEGGSV AKSAAWWKSF VEAGEEQRSV IARSTNKGSR NRNSNQRKRR KPANKTAKPT
E
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