| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3768 |
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| Symbol | |
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| ID | 6118117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4587270 |
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| End bp | 4591067 |
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| Gene Length | 3798 bp |
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| Protein Length | 1265 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635331 |
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| Product | protease domain-containing protein |
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| Protein accession | YP_001762122 |
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| Protein GI | 170728096 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000500867 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00925065 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAAACTC AAATCGCAAT TGCAGTATCT TCTGCGCTAC TCTCTATGTC TGTCAATGCT
GCAGGACATG CAGGCAGTGA GATCAATGCT GTGTTATCTA AATCAGCTGA AGTTAGAGCA
CAGATCCCAA CTGTAGACTC TAAGTCAGAG ACGCAGAATC AAGTGGTACG TAACCATGCT
GTGTTTACTC CAGAGGCCAA CTTAGGTTCA GGTACTCATA GATACTTCGT ACGTTTAATT
GAAAATCCAG TTGCTCTCTA TCAGGGAGGA GTTGATGGAT ATGAAGCAAC CTCGTCAGAT
GTTGTTAAAG GTAAGAGTAG AAAACTAGAT GTAAACAGTA AAAGTGTTAA ATCATACCGC
TCTTTTCTAA ACTCTCGTCA AGACAGTGTT ATTGCTAGAG CAACCTCTTT ACTAGGTGAG
CTGAACATCA AGCAAAGAAC AACACTTGCT TATAACGGTA TGGTCGTTGA GATGACCCAA
GCTCAAGCGG CTAAGTTATC TAAAGTTGCT GGTATTGCGA ATATTCAGAG AGAAGTTCTG
CGCAAAACCA TGACAGATTC AGGTCCTGCG ATAATTAAAG CGCCTGCAGT ATGGAGTGGT
GAAGCAACGG GAACTGCGAG TCAAGGTGAG GGGATGATTG TTGGTATCAT AGATACAGGT
ATCAATGCAG ATCACCCATC TTTTGCTGAT GTTGGTGGTG ATGATTACGA TCACACGAAC
CCATGGGGTC AAGGTACTTA CTCTGGTGAC TGTGCTGGAG ACTTCCCTGA GCTTTGTAAT
GATAAGTTGA TTGGTGTACA TAGCTGGCCT GCCGTAACAG ATGAGTATTT AGACTATGAT
CTGGATGTTC CACCAAATGG TGAAGATCAT AATGGTCATG GCTCACATAC CGCTGGTACA
ACAGCTGGTA ACGTACTTAA AGATGTTAAT GTGCCAGATG TTGATGGTGG GGAGACTGGT
GTTGTATTTG AATCTATGTC AGGTGTTGCG CCGCACGCAA ACATTGTCTC CTATCAGGTA
TGTCTTCCTG GTGAAGATGA TGATATTGGA TTTGCGGGTT GTTTACCTTC ATTAACCGTT
CTTGCGGTTG AGCATGCAAT TGAAAACGGT GTCGATGCAC TTAACTACTC TATTGGTGGT
GGTTCAAGTA ACCCGTGGAA TGATGCTGAT GCATTAGCTT TCTTATCTGC CCGTAAAGCA
GGTATACATG TAGCCACTTC TGCTGGTAAC TCAGGTCCAG GACCAGAAAC TGTAGGCTCG
CCAGGTGATG CACCTTGGTT GACCACCGTT GCTGCTTATA CCCATGATAG AGATTTTTCT
GACAAAACCG TTGGTAGCTT TACTGGTGGT GATACAGAGG CGCCTAAAGA GCTGACTGGT
AAGGCGATGA CTGGAGCTGT TACTGGCTCA ATCGTCTATG CTGGAAACTT TGATAATGCA
AATGATCCTG ATAACGATCC TGCCCAGTGT TTGGAGCCAT TTCCTGAAAA CACATTTGCT
GCCGACACTA TAGTTGTCTG TGATCGTGGT GAAATTGCTC GTGTTGATAA GGGCCGTCAT
GTGAAGGCGG GCGGTGCTGC AGGCTTGGTT TTGGCTAACA TACATGGAGA AGATGAGGCT
ACAAACGTTG TTGCTGATGC TCATGTATTA CCCGCCATTC ATATTGATGC TGATGACGGT
GATATGCTAC GCACTTGGTT AGCAAGTGGT ACTGGACATC AAGCTAGTAT AACAGGTACA
GAAGTCATTC ATGAGGAAGA GCTTGCTCGT ATCGCAGCAG ATTTTACTTC TCGTGGTCCA
AATAAGTCAG TACCAGATGT GATTGCACCA TCAATTGCAG CTCCAGGTGT TAGTATTTTT
GCCGCTTATG CTGACGATCA GTCAGATGCT TTCAAACAGT TTCCTGATCC GAATGATTAT
GGCTTCTTAA GTGGAACTTC AATGGCAAGT CCACATATTG CTGGTGCGTT AACTTTGCTA
GCAGGTATTC ATCCAGAATG GACTCCTGCT GAAGTTCAAT CTGCGTTAAT GATGACAGCA
AACCAAACTA CATTTAAAGA AGATGGCGAA ACTCCATCTG ATTTCTTTGA TATGGGGGCA
GGTTATGCAG ATATAGAGGC TGCGGCTAAA TCTGGTTTAG TCATGGATGA GACCTATGTC
AATTATGTGA AAGCAGATCC AGGGTTAAAT GGTCAACCTT CACAGATCAA TTTACCAACT
ATGGCTAATG CTAAGTGTGT GGGTGAATGT ACTTGGACTC GTACTGTTAA GGCTACTAAA
GCTGGAACAT GGAGCGCTAG TACTCTGGGT GTCACCGATG GCTTAGCACT TAGTGTCTTT
CCTGCTAGTT TTGAGTTAGA AGTAGGCGAA ACACAAGAGC TAACAATCAC AGCTGATGTG
TCCGCAGCAA GCGCAGGTTG GAATTTTGCT AACATTAAGC TTGCAGCTTC TGGCATGCCA
GAAGTTAAGT TACCTGTAGC TGTAATGAGC AATGGTAATA ATTTACCAGC GAGTGTGTCC
ATTACTGCTG GTCGAACTGA AGGCAGCATG ACTTATACGG GCTTTGTTGC AAGTGAGCTA
TCGGCTATCA CTGCTGGTGT TTATGATAAA GCAACGGATC TGATTGAACC TGCTGCTCTT
ACTGTGCCAG AAGATAGCCT TGATTATGTT GTTGTAGAGT TTGATGAAGT TGTTCCTAAT
GTCATATTTT CAACCTCTTC TGAGACAGCT CCAGATGTAG ATCTGCGTAT TCTTAATGGC
TCTTTCGCTA AAATAGGTAG CAGTGGTGGA CCTGATTCTG ATGAGTCAGT TTCATTTACT
AATCTACCAG CAGGTACATA CTACATAGTC GTTGATGGTT ATAAAGCTTC AACACCTGGT
GGATCAGATG CTGTAACTGT ACGAGTAACC TCTGTCGTGG CCGATGAAGC ATCATTGAGT
GATGATGTAT CTGTTAAAGT CTCTGAAGAT GAAGGAGAGT TTAGCCTCAC TTTTGATTGG
GATACTGATA AGAGTTCTTC AGGTATTCTT ATTCTTGAGT CTGGCGATAA GAGTGCTATG
TTGCAAGTTC CTTATAGTCT AGTTCGTAAG AATGATGTCA CTCATATCAC TAATTTGTCT
GATGCTATGA CTGCAGGTGA GGCGAGCCGA GTTAGTTTTG ATGTTGAGCC TAACTTCTCA
GATGAAGATA GGGAGTATAC ATTTACAGCT CAGATGTCAG CAGGTCATAA GGTTGATAAT
ATCTCTAATG AGGGTTCTCA TGAAGGAAAT ACCATCACTT GGAGTGTGAC TCAAGCAGCT
GCCTCTGGCG AAAGCCTTTC TGTTGGTTTT GACTTAATTC CAACGAAAGC AGGTGATGCA
TACGCACTGA AGTTAACCAA TGAACTTGGC TCGGATCTTG TTGAAGAGAC CATTAAGTTT
GGTGTGATGG AAGTTGCACC TGTTGCCATG ATTGACGCCC CTACTAGTGT TACGGATAGC
GCAATGATAA CGCTAGACGG GAGTGCATCT TATGACGGGA ATGATGATGA GTTGACCTAT
CAGTGGAAAC AAACTGGTGG TGCATACGTT GATCTAGGAG CCAATAGCCA GAGTGTCACT
TTTAATGCTC CTGAGGTGAA TGGTCAAAGT ACAGTTTTAT CATTTGAGTT AACCGTTTCT
GATGGTAATG GAAATTCTGA TACCTCAATG ACGACTGTTA CTGTAAGAGA AACGCCTGAT
TTTGGTGGCG GGTCTATGGG GTGGATTGCA ACCTTGTTAC TTCCGCTTGT TTGGATGAGA
CGGAAGTTTC ATGGTTGA
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| Protein sequence | MKTQIAIAVS SALLSMSVNA AGHAGSEINA VLSKSAEVRA QIPTVDSKSE TQNQVVRNHA
VFTPEANLGS GTHRYFVRLI ENPVALYQGG VDGYEATSSD VVKGKSRKLD VNSKSVKSYR
SFLNSRQDSV IARATSLLGE LNIKQRTTLA YNGMVVEMTQ AQAAKLSKVA GIANIQREVL
RKTMTDSGPA IIKAPAVWSG EATGTASQGE GMIVGIIDTG INADHPSFAD VGGDDYDHTN
PWGQGTYSGD CAGDFPELCN DKLIGVHSWP AVTDEYLDYD LDVPPNGEDH NGHGSHTAGT
TAGNVLKDVN VPDVDGGETG VVFESMSGVA PHANIVSYQV CLPGEDDDIG FAGCLPSLTV
LAVEHAIENG VDALNYSIGG GSSNPWNDAD ALAFLSARKA GIHVATSAGN SGPGPETVGS
PGDAPWLTTV AAYTHDRDFS DKTVGSFTGG DTEAPKELTG KAMTGAVTGS IVYAGNFDNA
NDPDNDPAQC LEPFPENTFA ADTIVVCDRG EIARVDKGRH VKAGGAAGLV LANIHGEDEA
TNVVADAHVL PAIHIDADDG DMLRTWLASG TGHQASITGT EVIHEEELAR IAADFTSRGP
NKSVPDVIAP SIAAPGVSIF AAYADDQSDA FKQFPDPNDY GFLSGTSMAS PHIAGALTLL
AGIHPEWTPA EVQSALMMTA NQTTFKEDGE TPSDFFDMGA GYADIEAAAK SGLVMDETYV
NYVKADPGLN GQPSQINLPT MANAKCVGEC TWTRTVKATK AGTWSASTLG VTDGLALSVF
PASFELEVGE TQELTITADV SAASAGWNFA NIKLAASGMP EVKLPVAVMS NGNNLPASVS
ITAGRTEGSM TYTGFVASEL SAITAGVYDK ATDLIEPAAL TVPEDSLDYV VVEFDEVVPN
VIFSTSSETA PDVDLRILNG SFAKIGSSGG PDSDESVSFT NLPAGTYYIV VDGYKASTPG
GSDAVTVRVT SVVADEASLS DDVSVKVSED EGEFSLTFDW DTDKSSSGIL ILESGDKSAM
LQVPYSLVRK NDVTHITNLS DAMTAGEASR VSFDVEPNFS DEDREYTFTA QMSAGHKVDN
ISNEGSHEGN TITWSVTQAA ASGESLSVGF DLIPTKAGDA YALKLTNELG SDLVEETIKF
GVMEVAPVAM IDAPTSVTDS AMITLDGSAS YDGNDDELTY QWKQTGGAYV DLGANSQSVT
FNAPEVNGQS TVLSFELTVS DGNGNSDTSM TTVTVRETPD FGGGSMGWIA TLLLPLVWMR
RKFHG
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