| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3720 |
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| Symbol | |
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| ID | 6118068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4531589 |
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| End bp | 4534162 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635283 |
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| Product | ATP-dependent chaperone ClpB |
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| Protein accession | YP_001762075 |
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| Protein GI | 170728049 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00907871 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.367074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTCG ATCGTATGAC CAATAAATTT CAAACGGCAA TTTCCGATGC GCAATCTCTC
GCGCTAGGTC GTGATCATCA GTTTATTGAA CCCATTCATC TTATGATGGC CTTACTGAAT
CAAGATAATG GGTCTATTCA CCCGTTATTA ACTCAGGCTG GCATTAATGT TAGTTCGTTG
AGGTCTTTGG TTAGCCAAGA GTTGGAGCGT TTACCAAAGG TGGAGGGAAC CGGAGGAGAT
ATTCAGCTAT CACAATCTCT GATCCGTCTG TTGAACCTAT GTGACAAACT CTCTCAGAAA
CGCAAAGATA AATATATCTC CAGTGAGTTA TTTATACTCG CAGCACTTGA AGGAAACGAT
ACGCTTGCTC AAAGCTTGAA AAAATCTGGC GCGACGAAAG AGTTGATGGA AGAAACGATA
AAACAGGTAC GCGCCGGAAA GAATATCGAC GATCCTAATG CGGAAGATCA AAGGCAAGCA
CTTAAAAAGT TTACCGTCGA TCTGACTGAG CGTGCGGAGC AGGGGAAACT TGACCCTGTT
ATTGGGCGTG ATGATGAGAT CCGCCGTACA ATTCAAGTGT TACAGCGAAG AAGTAAAAAC
AACCCTGTAT TGATTGGTGA ACCAGGTGTG GGTAAAACCG CCATTGTTGA GGGGTTAGCT
CAGCGGATCA TTAATGGTGA AGTACCCGAA GGGATAAAAA ACAAGCGTGT GTTGTCATTA
GACATGGGCT CGTTAGTTGC TGGGGCTAAA TATCGTGGTG AATTTGAGGA AAGATTAAAG
GCGGTTCTCA ATGAGTTGTC TCAAGAGGAG GGGCAAGTGA TCCTCTTTAT CGATGAGCTG
CATACTATGG TTGGCGCAGG TAAAGGGGAT GGTGCTATGG ATGCGGGCAA TATGCTTAAA
CCTGCATTAG CACGTGGTGA CCTTCACTGT GTGGGTGCAA CGACCTTAGA TGAGTATCGT
CAATATATTG AAAAAGATGC GGCACTTGAA AGACGCTTTC AAAAAGTCTT GGTTGAAGAG
CCGAGTGTTG AGGATACTGT TGCTATTCTA CGTGGTCTAA AAGAGCGTTA TGAGCTTCAT
CATCATGTTG AGATCACTGA TCCTGCGATT GTTGCTGCCG CTAGCATGTC AAATCGTTAT
GTTTCTGATA GGAAACTACC GGATAAAGCA ATAGATCTTA TCGATGAAGC TGCATCGAGT
ATCCGAATCC AGATTGACTC TAAACCTGAG CCGCTGGACA AATTGGAGCG CCGTGCCATT
CAGCTTAAGC TAGAGGAGCA AGCACTGACA AAAGAAGCTG ATGAAGCTAG CCTTCGCCGC
CTGCTGACTA TACGAAAAGA GCTAAGAGAA GTTGAAGTGA AGGCCTCTGA GCTAAATGAG
GTGTGGCGAA CAGAGAAGGC TGCACTAGCT GGAACCCAAC ATATAAAGTC GGATCTGGAG
CAGGCAAGAT TGGATCTCGA TGTTGCTCGC AGAGCTAGTG ATCTGACTCG TATGTCTGAA
CTGCAGTACG GTCGTATTCC TGAACTAGAG AAACAGCTGG ACTTAGCATC TCAAGCTGAG
ATGCAAGAGA TGACCTTACT TAGAAATAAA GTCACGGATG TGGAGATCGC TGAAGTACTA
TCTCGTGCTA CTGGTATTCC TGTTTCTAAG ATGCTTGAAG GTGAGCGAGA AAAGCTTCTG
CATATGGAGG ATGCTCTGCA TACCCAAGTG ATAGGCCAGA ATGAAGCTGT GGATGCGGTT
TCGAATGCGA TTAGACGTAG TCGAGCTGGT CTATCAGATC CCGATCGTCC AATTGGTTCG
TTTCTGTTTT TAGGTCCAAC AGGGGTGGGG AAAACTGAGC TATGTAAGTC ACTGGCTAAG
TTTCTCTTCG ATACTGAGTC AGCATTAGTG CGTATCGACA TGTCAGAGTT TATGGAAAAA
CACTCTGTTG CGCGTCTGCT TGGGGCGCCT CCAGGATATG TGGGCTATGA AGAGGGGGGC
TACCTAACCG AGGCTGTAAG ACGCAAACCT TACTCAGTGA TCTTACTTGA TGAAGTTGAG
AAGGCGCACC CAGATGTATT TAATATCTTG TTGCAGGTAC TTGATGATGG TCGCTTAACC
GATGGTCAAG GAAGAACCGT AGATTTTAGA AATACTGTTG TGATCATGAC CTCGAATCTA
GGTTCAGATA TCATTCAGGA GCGCTTTTCG ACCCTATCTT ATGATGAGAT GAAGTCAGAG
GTGATGAATG TTGTTGTTCA TAGTTTCAGA CCTGAGTTTC TGAACCGAGT TGATGAGACT
GTAGTGTTCC ATCCTTTGGG CGAAAAGCAT ATTGAACATA TTGCTTCAAT CCAAATTGAA
TCTTTGATGC GACGTCTAGC GGAAAAAGAT TACGAGCTAG ATATCAGTGA TGACGCGCTT
TCCTTTATTG CTAGAGCTGG GTTTGACCCC GTCTATGGTG CGCGGCCGTT AAAGCGTGCT
TTACAGCAAG AGGTGGAGAA CCCGTTAGCT CAGAAGATAC TAAGCGGTAG TTTAGTGCCG
GGTAAACCGA TTATCGTTGA GAATGAAGAG GGTGAACTCT CCTTTAAGCA GTAA
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| Protein sequence | MRLDRMTNKF QTAISDAQSL ALGRDHQFIE PIHLMMALLN QDNGSIHPLL TQAGINVSSL
RSLVSQELER LPKVEGTGGD IQLSQSLIRL LNLCDKLSQK RKDKYISSEL FILAALEGND
TLAQSLKKSG ATKELMEETI KQVRAGKNID DPNAEDQRQA LKKFTVDLTE RAEQGKLDPV
IGRDDEIRRT IQVLQRRSKN NPVLIGEPGV GKTAIVEGLA QRIINGEVPE GIKNKRVLSL
DMGSLVAGAK YRGEFEERLK AVLNELSQEE GQVILFIDEL HTMVGAGKGD GAMDAGNMLK
PALARGDLHC VGATTLDEYR QYIEKDAALE RRFQKVLVEE PSVEDTVAIL RGLKERYELH
HHVEITDPAI VAAASMSNRY VSDRKLPDKA IDLIDEAASS IRIQIDSKPE PLDKLERRAI
QLKLEEQALT KEADEASLRR LLTIRKELRE VEVKASELNE VWRTEKAALA GTQHIKSDLE
QARLDLDVAR RASDLTRMSE LQYGRIPELE KQLDLASQAE MQEMTLLRNK VTDVEIAEVL
SRATGIPVSK MLEGEREKLL HMEDALHTQV IGQNEAVDAV SNAIRRSRAG LSDPDRPIGS
FLFLGPTGVG KTELCKSLAK FLFDTESALV RIDMSEFMEK HSVARLLGAP PGYVGYEEGG
YLTEAVRRKP YSVILLDEVE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFR NTVVIMTSNL
GSDIIQERFS TLSYDEMKSE VMNVVVHSFR PEFLNRVDET VVFHPLGEKH IEHIASIQIE
SLMRRLAEKD YELDISDDAL SFIARAGFDP VYGARPLKRA LQQEVENPLA QKILSGSLVP
GKPIIVENEE GELSFKQ
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