| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3712 |
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| Symbol | |
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| ID | 6118056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4518587 |
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| End bp | 4519759 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635271 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_001762067 |
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| Protein GI | 170728041 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000641261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0005316 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTTTT TAAATCGACC ATTAAAATCA CTTATTCTTG CAACTAGCCT TGCATCCTCT
TTTGTTTTCG CCGCTCCCGT TGTGACGCCA AATGCACCAA CCGTGGCAGC GAAAGCCTTT
GTCTTAATGG ATTACAATAC AGGACAGGTT ATTGCAGAAG AGAACGCCTA CGAAAGTTTA
AATCCAGCCA GCTTGACTAA GATGATGACC AGTTATGTTA TTGGTCATGA GATCAAAGTC
GGCAATATCT CTCCCAATGA TCAGGTGACC ATCAGTAAAA AAGCATGGTC AAAGAACTTT
CCAGACTCTT CTAAGATGTT TATTGAAGTC GGTAAGCAGG TCACTGTAGA CGATCTTAAC
CACGGTATTA TTATCCAGTC GGGTAACGAT GCCTGTGTCG CCATGGCCGA GCATATTGCC
GGCACCGAAG ATGGCTTTGT TGATCTGATG AACTCATGGG CCAAGCAACT TGGAATGCAG
GACAGTTACT TTGAGAACTC TCACGGACTG GATTCTGAAA ACCACAAAAC AACTGCTTAT
GATATGGCCA TTTTAGGGGC TGCACTTATC CGCGACGTAC CAGAAGAGTA TGTTCTGTAT
AAGAAGAAAT CGTTCACATA CAACGGTATC AAGCAATATA ACCGTAATGG ATTGCTCTGG
GATAAGAGTA TGCATGTAGA CGGTATTAAG ACAGGTCATA CTTCTGGTGC AGGCTACAAC
TTAGTGACCT CAGCAACCAA AGATGGCATG CGCTTAGTTG CTGTTGTGAT GGGCACGAAG
AGCGAAGCTG CTCGTAAAGC TGAAAGCAAA AAGATCTTAA ATTATGGCTT CCGTTTCTTT
GAAACCATCA CGCCATACAA GGCTGGTGAC AGTTTCGTTA CTCAGAAAAT CTGGTACGGC
GACAAAGAAT CTGTTGATTT AGGGGTTACC ACAGATACAC CTATCACAAT CAATCGTGGC
CAAGCTAAAA ACCTAAAAGC CAACTTTGAG CTCACAAAAG AGCTTACTGC ACCACTGGCA
AAAGGAGAGA CTGTCGGCCG TATCTACTTC CAACTAAACG GTAAAGATAT CGCTCAATTC
CCGCTTGTTA CTTTGCAAGA GGTAAACGAA GGCAGTTGGT TCAGTAAGTT AATGGACTAC
TTCACCCAGA TGTTCACAGG TTGGTTTAGC TAA
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| Protein sequence | MNFLNRPLKS LILATSLASS FVFAAPVVTP NAPTVAAKAF VLMDYNTGQV IAEENAYESL
NPASLTKMMT SYVIGHEIKV GNISPNDQVT ISKKAWSKNF PDSSKMFIEV GKQVTVDDLN
HGIIIQSGND ACVAMAEHIA GTEDGFVDLM NSWAKQLGMQ DSYFENSHGL DSENHKTTAY
DMAILGAALI RDVPEEYVLY KKKSFTYNGI KQYNRNGLLW DKSMHVDGIK TGHTSGAGYN
LVTSATKDGM RLVAVVMGTK SEAARKAESK KILNYGFRFF ETITPYKAGD SFVTQKIWYG
DKESVDLGVT TDTPITINRG QAKNLKANFE LTKELTAPLA KGETVGRIYF QLNGKDIAQF
PLVTLQEVNE GSWFSKLMDY FTQMFTGWFS
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